RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 RPS6P62753 249 aaKnown RBP6.45□□□□□ -1.38
PDE4D-229ENST00000638939 ZNF543Q08ER8 600 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 BFSP2Q13515 415 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 TMEM67Q5HYA8 995 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 TMEM63BQ5T3F8 832 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 GPATCH4Q5T3I0 446 aaKnown RBP6.45□□□□□ -1.38
PDE4D-229ENST00000638939 TTBK2Q6IQ55 1244 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 RNF207Q6ZRF8 634 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 SESTD1Q86VW0 696 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 CCDC155Q8N6L0 562 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 RGS22Q8NE09 1264 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 CAGE1Q8TC20 777 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 AFAP1L1Q8TED9 768 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 PBXIP1Q96AQ6 731 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 TTC14Q96N46 770 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 PURBQ96QR8 312 aaKnown RBP6.45□□□□□ -1.38
PDE4D-229ENST00000638939 TMEM47Q9BQJ4 181 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 FRMPD2Q68DX3 1309 aaPredicted RBP6.45□□□□□ -1.38
PDE4D-229ENST00000638939 CCDC171Q6TFL3 1326 aa6.45□□□□□ -1.38
PDE4D-229ENST00000638939 A0A0D9SFI3 127 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 B4DLN1 442 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 PPP1R3GB7ZBB8 358 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 PARNO95453 639 aaKnown RBP6.44□□□□□ -1.38
PDE4D-229ENST00000638939 FGAP02671 866 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MYL3P08590 195 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 IQCF3P0C7M6 154 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 BMP1P13497 986 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MYOGP15173 224 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 CALML3P27482 149 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 SOX11P35716 441 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 PLA2G5P39877 138 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MRPL12P52815 198 aaKnown RBP6.44□□□□□ -1.38
PDE4D-229ENST00000638939 TAP1Q03518 808 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
PDE4D-229ENST00000638939 NBPF20Q3BBV1 942 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MCMDC2Q4G0Z9 681 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 HERC6Q8IVU3 1022 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 ZNF710Q8N1W2 664 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 RDH13Q8NBN7 331 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 GLMNQ92990 594 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 RNF41Q9H4P4 317 aaPredicted RBP6.44□□□□□ -1.38
PDE4D-229ENST00000638939 INCENPQ9NQS7 918 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 LIMD1Q9UGP4 676 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 COG5Q9UP83 839 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 PCDHB15Q9Y5E8 787 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MTCH2Q9Y6C9 303 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 ABCB11O95342 1321 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MYH9P35579 1960 aaKnown RBP6.44□□□□□ -1.38
PDE4D-229ENST00000638939 MYO7AQ13402 2215 aa6.44□□□□□ -1.38
PDE4D-229ENST00000638939 TTC3P53804 2025 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 PLXNA4Q9HCM2 1894 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 EPOPA6NHQ4 379 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 KDM4AO75164 1064 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 ARIH2O95376 493 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 F2P00734 622 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 CXCL10P02778 98 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 MMP3P08254 477 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 HSPD1P10809 573 aaKnown RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 PDE1AP54750 535 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 GHRHRQ02643 423 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 TFF2Q03403 129 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 ARHGAP1Q07960 439 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 KCNA1Q09470 495 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 CDC37Q16543 378 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 RRP12Q5JTH9 1297 aaKnown RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 LRRC8DQ7L1W4 858 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 DEFB128Q7Z7B8 93 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 ZNF589Q86UQ0 364 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 TBC1D10CQ8IV04 446 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 EMID1Q96A84 441 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-229ENST00000638939 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 FAM227BQ96M60 508 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 CTAGE1Q96RT6 745 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 IWS1Q96ST2 819 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 KATNAL1Q9BW62 490 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 C1QTNF1Q9BXJ1 281 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 TOMM22Q9NS69 142 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 NOD1Q9Y239 953 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 NEDD4P46934 1319 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 KMT2EQ8IZD2 1858 aa6.43□□□□□ -1.38
PDE4D-229ENST00000638939 KIF28PB7ZC32 967 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 TLL1O43897 1013 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 LILRB3O75022 631 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 EFCAB14O75071 495 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 ARHGEF15O94989 841 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 GH1P01241 217 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 TXNP10599 105 aaKnown RBP6.42□□□□□ -1.38
PDE4D-229ENST00000638939 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-229ENST00000638939 SELPP16109 830 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 KCNJ6P48051 423 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 KCNQ1P51787 676 aa6.42□□□□□ -1.38
PDE4D-229ENST00000638939 MFAP1P55081 439 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms