RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 NOVA2Q9UNW9 492 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 OPLAHO14841 1288 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CLIC2O15247 247 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 MAP2K2P36507 400 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CYP4A11Q02928 519 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 NEK8Q86SG6 692 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 MGARPQ8TDB4 240 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 STXBP3O00186 592 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 ECM1Q16610 540 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
KCNMA1-246ENST00000638848 SLIT3O75094 1523 aa12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 SCN11AQ9UI33 1791 aa12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 TARSL2A2RTX5 802 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 MEA1Q16626 185 aa12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 SLC9C1Q4G0N8 1177 aa12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 REXO1Q8N1G1 1221 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.4
KCNMA1-246ENST00000638848 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 DAPK3O43293 454 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 TUBBP07437 444 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 SIK1P57059 783 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 NBPF5PQ86XG9 351 aaPredicted RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 TRIM51Q9BSJ1 452 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 ATRNO75882 1429 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 SLC9A1P19634 815 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 CDR1P51861 262 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 PTF1AQ7RTS3 328 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 EYA3Q99504 573 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.41
KCNMA1-246ENST00000638848 NTSR2O95665 410 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 AMPD3Q01432 767 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 QPCTQ16769 361 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 MAEAQ7L5Y9 396 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 NLRP14Q86W24 1093 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 MMTAG2Q9BU76 263 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 GRB10Q13322 594 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 TLR2O60603 784 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 FECHP22830 423 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 KRT79Q5XKE5 535 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 TICAM2Q86XR7 235 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 TSG101Q99816 390 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 FOXO6A8MYZ6 492 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 POTECB2RU33 542 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
KCNMA1-246ENST00000638848 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms