RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 IQCKQ8N0W5 287 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
SNIP1-204ENST00000638725 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
SNIP1-204ENST00000638725 DDX12PQ92771 950 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
SNIP1-204ENST00000638725 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 KRT12Q99456 494 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 NOL4O94818 638 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 TDP2O95551 362 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 GUCY2CP25092 1073 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 TRADDQ15628 312 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 TBC1D9BQ66K14 1250 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 CASKIN2Q8WXE0 1202 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 PIK3R5Q8WYR1 880 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 RAD54LQ92698 747 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 UBA5Q9GZZ9 404 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 KANSL2Q9H9L4 492 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
SNIP1-204ENST00000638725 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 KCNQ4P56696 695 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 GUCY1A3Q02108 690 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SLC9C1Q4G0N8 1177 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SPTY2D1Q68D10 685 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SUGP1Q8IWZ8 645 aaKnown RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SNX29Q8TEQ0 813 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 TSG101Q99816 390 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
SNIP1-204ENST00000638725 CEP72Q9P209 647 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 EDIL3O43854 480 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 ARID5AQ03989 594 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 EHHADHQ08426 723 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 DDB1Q16531 1140 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 KDM7AQ6ZMT4 941 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
SNIP1-204ENST00000638725 TRAF5O00463 557 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 SERPING1P05155 500 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNIP1-204ENST00000638725 TMEM266Q2M3C6 531 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 EYA3Q99504 573 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 ANKRD2Q9GZV1 360 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 RNF14Q9UBS8 474 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 NR1D1P20393 614 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 LSP1P33241 339 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 COASYQ13057 564 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 NAB2Q15742 525 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 ECM1Q16610 540 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 ZCWPW2Q504Y3 356 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 MYOCDQ8IZQ8 938 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-204ENST00000638725 INPP4AQ96PE3 977 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-204ENST00000638725 RIC8AQ9NPQ8 531 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 TBC1D7Q9P0N9 293 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
SNIP1-204ENST00000638725 A0A087X0T9 212 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 RAD51CO43502 376 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 FAM228BP0C875 321 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.48
SNIP1-204ENST00000638725 CDK8P49336 464 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 NT5C2P49902 561 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.48
SNIP1-204ENST00000638725 RAPGEF1Q13905 1077 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 KRT79Q5XKE5 535 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 KLHL7Q8IXQ5 586 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 GJA10Q969M2 543 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 COA7Q96BR5 231 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 NLRP3Q96P20 1036 aa12.02□□□□□ -0.48
SNIP1-204ENST00000638725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.48
SNIP1-204ENST00000638725 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
SNIP1-204ENST00000638725 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 A6NNZ2 444 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.49
SNIP1-204ENST00000638725 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 TUBB8Q3ZCM7 444 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 MCTP2Q6DN12 878 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 B4GALNT4Q76KP1 1039 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 MREGQ8N565 214 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 ADAMTS1Q9UHI8 967 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 PCDHGC5Q9Y5F6 944 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 CAPN7Q9Y6W3 813 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 FRMPD2Q68DX3 1309 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms