RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ZNF341Q9BYN7 854 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 PPANQ9NQ55 473 aaKnown RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 FTCDO95954 541 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 TAB3Q8N5C8 712 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 TRIM7Q9C029 511 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 NHEJ1Q9H9Q4 299 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 FEZ2Q9UHY8 353 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 PRCPP42785 496 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 RNF169Q8NCN4 708 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 MGARPQ8TDB4 240 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 PDLIM2Q96JY6 352 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 GAP43P17677 238 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 GPR162Q16538 588 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 CAPN12Q6ZSI9 719 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 B4GALNT4Q76KP1 1039 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 PODNQ7Z5L7 613 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 MTA3Q9BTC8 594 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 SENP2Q9HC62 589 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 SH3GLB2Q9NR46 395 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 BSPRYQ5W0U4 402 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 SCYL2Q6P3W7 929 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
SCARB2-208ENST00000638372 SRBD1Q8N5C6 995 aaKnown RBP15.68■□□□□ 0.1
SCARB2-208ENST00000638372 NT5C1BQ96P26 610 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 TTLL3Q9Y4R7 772 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 MFAP3LO75121 409 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 CCDC89Q8N998 374 aa15.68■□□□□ 0.1
SCARB2-208ENST00000638372 MOCS3O95396 460 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 NSFP46459 744 aaKnown RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 MTMR3Q13615 1198 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 AOC3Q16853 763 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 FAM47CQ5HY64 1035 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 CASC4Q6P4E1 433 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 IGDCC4Q8TDY8 1250 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 VPS37BQ9H9H4 285 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 KMT5AQ9NQR1 393 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 NRBP2Q9NSY0 501 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 BZW2Q9Y6E2 419 aaKnown RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 PIK3C2BO00750 1634 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 INO80B-WBP1J3KQ70 363 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 TMOD1P28289 359 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 CIAPIN1Q6FI81 312 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 INO80BQ9C086 356 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 SSX2IPQ9Y2D8 614 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 PABPN1LA6NDY0 278 aaKnown RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 E9PMD0 336 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 RGS16O15492 202 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-208ENST00000638372 PTK2Q05397 1052 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 CLUL1Q15846 466 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 CCDC14Q49A88 953 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 ANKRD42Q8N9B4 389 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
SCARB2-208ENST00000638372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-208ENST00000638372 H0YCG3 227 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ASNSP08243 561 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ALDH3A1P30838 453 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 DDIT3P35638 169 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ADCY8P40145 1251 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 KCTD2Q14681 263 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 KCTD16Q68DU8 428 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 PANX2Q96RD6 677 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 OVOS2A0A0G2JMS6 1433 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 TEX33O43247 280 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 RCAN1P53805 252 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 MYO1FO00160 1098 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 AKR1B1P15121 316 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ADRA2BP18089 450 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 KIF11P52732 1056 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ANTXR2P58335 489 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 LACTBP83111 547 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-208ENST00000638372 FAM83BQ5T0W9 1011 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 C12orf60Q5U649 245 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ADPGKQ9BRR6 497 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 F5H6K3 240 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 TNNC2P02585 160 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 LRRC63Q05C16 580 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 KLRC3Q07444 240 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 GRM4Q14833 912 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 ZSCAN26Q16670 478 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 MTERF2Q49AM1 385 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 BARHL2Q9NY43 387 aa15.66■□□□□ 0.1
SCARB2-208ENST00000638372 INPP5BP32019 993 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms