RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	PURB	Q96QR8	312 aa	Known RBP	13.26	□□□□□ -0.29
CLN6-223	ENST00000637823	ADD3	Q9UEY8	706 aa	Known RBP	13.26	□□□□□ -0.29
CLN6-223	ENST00000637823	PP2D1	A8MPX8	630 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	STRN	O43815	780 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	AR	P10275	920 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	FCER1A	P12319	257 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	ITGB5	P18084	799 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	YY1	P25490	414 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	KCTD2	Q14681	263 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	KARS	Q15046	597 aa	Known RBP	13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	E2F4	Q16254	413 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	RRAGB	Q5VZM2	374 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	KRT79	Q5XKE5	535 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	NLRX1	Q86UT6	975 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	IFNL1	Q8IU54	200 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	ANKRD13C	Q8N6S4	541 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	FAM133A	Q8N9E0	248 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	MMP19	Q99542	508 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	RIT2	Q99578	217 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	ZNF577	Q9BSK1	485 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	MMTAG2	Q9BU76	263 aa	Known RBP	13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	WDR11	Q9BZH6	1224 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	CUEDC2	Q9H467	287 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	TSPY26P	Q9H489	355 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	DISC1	Q9NRI5	854 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	KIAA1468	Q9P260	1216 aa		13.25	□□□□□ -0.29
CLN6-223	ENST00000637823	DNAJC25-GNG10	A0A024R161	153 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	POTEM	A6NI47	508 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	IPO5	O00410	1097 aa	Known RBP	13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	PSMD10	O75832	226 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	CCDC192	P0DO97	292 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	STAT6	P42226	847 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	TM4SF4	P48230	202 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	ALDH5A1	P51649	535 aa	Predicted RBP	13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	CNTN2	Q02246	1040 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	SPIRE1	Q08AE8	756 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	STXBP2	Q15833	593 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	FAM110C	Q1W6H9	321 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	LRCH2	Q5VUJ6	765 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	SASS6	Q6UVJ0	657 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	SH3RF1	Q7Z6J0	888 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	RASSF8	Q8NHQ8	419 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	ERMN	Q8TAM6	284 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	GJA10	Q969M2	543 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	GPRASP2	Q96D09	838 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	ZFP91	Q96JP5	570 aa	Predicted RBP	13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	UIMC1	Q96RL1	719 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	MPHOSPH6	Q99547	160 aa	Known RBP	13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	TEKT3	Q9BXF9	490 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	KCNH7	Q9NS40	1196 aa		13.24	□□□□□ -0.29
CLN6-223	ENST00000637823	MCM3AP	O60318	1980 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	LOC102724159	A0A0B4J2E5	919 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	SOWAHB	A6NEL2	793 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	GAS7	O60861	476 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	EIF3J	O75822	258 aa	Known RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	PPP2R5C	Q13362	524 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	MTMR1	Q13613	665 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	PWP2	Q15269	919 aa	Known RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	TAF1C	Q15572	869 aa	Predicted RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	HYI	Q5T013	277 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	WDR78	Q5VTH9	848 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	PDXDC2P	Q6P474	469 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	OTOP1	Q7RTM1	612 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	ABRA	Q8N0Z2	381 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	SNX29	Q8TEQ0	813 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	PAGE5	Q96GU1	130 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	CDK5RAP3	Q96JB5	506 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	CDHR1	Q96JP9	859 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	INPP4A	Q96PE3	977 aa	Predicted RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	FUCA2	Q9BTY2	467 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	PORCN	Q9H237	461 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	R3HDML	Q9H3Y0	253 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	EFCC1	Q9HA90	598 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	MAGEF1	Q9HAY2	307 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	AGO4	Q9HCK5	861 aa	Known RBP	13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	TBC1D22B	Q9NU19	505 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	STK17A	Q9UEE5	414 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	VAV3	Q9UKW4	847 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	DOCK3	Q8IZD9	2030 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	LOXHD1	Q8IVV2	1947 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	DOCK5	Q9H7D0	1870 aa		13.23	□□□□□ -0.29
CLN6-223	ENST00000637823	ADGRA2	Q96PE1	1338 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	KDM3A	Q9Y4C1	1321 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	GOLGA6L3	A6NEY3	463 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	PLCG1	P19174	1290 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	EDNRB	P24530	442 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	MAPK4	P31152	587 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	CCT6A	P40227	531 aa	Known RBP	13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	TYRO3	Q06418	890 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	PDE4D	Q08499	809 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	GRB10	Q13322	594 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	PNOC	Q13519	176 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	POSTN	Q15063	836 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	ZRSR1	Q15695	479 aa	Known RBP	13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	DEFB115	Q30KQ5	88 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	NCAPH2	Q6IBW4	605 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	GAS2L3	Q86XJ1	694 aa		13.22	□□□□□ -0.29
CLN6-223	ENST00000637823	REM2	Q8IYK8	340 aa	Predicted RBP	13.22	□□□□□ -0.29

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