RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CCDC42Q96M95 316 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD2-227ENST00000637572 KCPQ6ZWJ8 1503 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 NDUFB10O96000 172 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 STAT3P40763 770 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 FSTL1Q12841 308 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 NR5A1Q13285 461 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PTF1AQ7RTS3 328 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 FAM81BQ96LP2 452 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 FERMT1Q9BQL6 677 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 CSRNP2Q9H175 543 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 RNF146Q9NTX7 359 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 NFE2L3Q9Y4A8 694 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 MAFGO15525 162 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 KRT86O43790 486 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 EXOC3O60645 756 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 GADD45BO75293 160 aaPredicted RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 RPN1P04843 607 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 CCDC175P0C221 793 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 STX17P56962 302 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 SNRNP48Q6IEG0 339 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 NELFBQ8WX92 580 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 RMDN3Q96TC7 470 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 ADPGKQ9BRR6 497 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 NAA15Q9BXJ9 866 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 OCEL1Q9H607 264 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 TMEM206Q9H813 350 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PANK4Q9NVE7 773 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 CEP290O15078 2479 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 RGPD1P0DJD0 1748 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 PDHBP11177 359 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CETPP11597 493 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 P4HA1P13674 534 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CDC27P30260 824 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CASQ1P31415 396 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CAP2P40123 477 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 POLGP54098 1239 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 ATN1P54259 1190 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 EVCP57679 992 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CEP135Q66GS9 1140 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 USP50Q70EL3 339 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 GMCL1P1Q8NEA9 526 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CHST13Q8NET6 341 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 TRERF1Q96PN7 1200 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 KIF2CQ99661 725 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 TSGA10Q9BZW7 698 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 IFNKQ9P0W0 207 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 WDR64B1ANS9 1081 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 IKBKBO14920 756 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 NR1I2O75469 434 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 STAM2O75886 525 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 U2AF2P26368 475 aaKnown RBP eCLIP6.1□□□□□ -1.436e-7■■■□□ 16.4
CHD2-227ENST00000637572 TIE1P35590 1138 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 NDUFA8P51970 172 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ARHGAP4P98171 946 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 PDIA5Q14554 519 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 SPECC1Q5M775 1068 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ODR4Q5SWX8 454 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 DYMQ7RTS9 669 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ANKS1AQ92625 1134 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 PRMT6Q96LA8 375 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 MKNK1Q9BUB5 465 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 AGXT2Q9BYV1 514 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 TRIM6Q9C030 488 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 RPAP3Q9H6T3 665 aaPredicted RBP6.1□□□□□ -1.43
CHD2-227ENST00000637572 KIAA1024Q9UPX6 916 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 PFASO15067 1338 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 BCRP11274 1271 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 FCER1AP12319 257 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 SKILP12757 684 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 SLC8A3P57103 927 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ANTXR2P58335 489 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 FANCCQ00597 558 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 KIF5AQ12840 1032 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 TRPC3Q13507 836 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 SPATA1Q5VX52 437 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ERO1BQ86YB8 467 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 CBX8Q9HC52 389 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 PAXBP1Q9Y5B6 917 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 ADGRG1Q9Y653 693 aa6.1□□□□□ -1.43
CHD2-227ENST00000637572 NMT2O60551 498 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TACC1O75410 805 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 HUNKP57058 714 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TROAPQ12815 778 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TEX35Q5T0J7 233 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 LDHDQ86WU2 507 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 MCPH1Q8NEM0 835 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TCP11Q8WWU5 503 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 OTUD5Q96G74 571 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TIPINQ9BVW5 301 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms