RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZBBXA8MT70 800 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 NOP56O00567 594 aaKnown RBP21.81■■□□□ 1.08
CLN6-221ENST00000637494 ZBTB43O43298 467 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 FIBPO43427 364 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 SORBS3O60504 671 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 NEDD9Q14511 834 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 RAB30Q15771 203 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 PCNX4Q63HM2 1172 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 APOA5Q6Q788 366 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 NLRX1Q86UT6 975 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 CAGE1Q8TC20 777 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 KAT2BQ92831 832 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 TIFAQ96CG3 184 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 ZFP91Q96JP5 570 aaPredicted RBP21.81■■□□□ 1.08
CLN6-221ENST00000637494 CDX2Q99626 313 aaPredicted RBP21.81■■□□□ 1.08
CLN6-221ENST00000637494 EHMT1Q9H9B1 1298 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 SLC4A7Q9Y6M7 1214 aa21.81■■□□□ 1.08
CLN6-221ENST00000637494 SPDYE3A6NKU9 549 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 F2P00734 622 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 ZNF286BP0CG31 522 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
CLN6-221ENST00000637494 RTN1Q16799 776 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 HEATR3Q7Z4Q2 680 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 DEFB128Q7Z7B8 93 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 INPP4AQ96PE3 977 aaPredicted RBP21.8■■□□□ 1.08
CLN6-221ENST00000637494 TTYH1Q9H313 450 aaPredicted RBP21.8■■□□□ 1.08
CLN6-221ENST00000637494 RTEL1Q9NZ71 1219 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 GTF2IRD1Q9UHL9 959 aa21.8■■□□□ 1.08
CLN6-221ENST00000637494 NAP1L2Q9ULW6 460 aaPredicted RBP21.8■■□□□ 1.08
CLN6-221ENST00000637494 MEIS2O14770 477 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 REC8O95072 547 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 ICAM3P32942 547 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 MRPS9P82933 396 aaKnown RBP21.79■■□□□ 1.08
CLN6-221ENST00000637494 SP2Q02086 613 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 COL9A3Q14050 684 aaPredicted RBP21.79■■□□□ 1.08
CLN6-221ENST00000637494 HSDL1Q3SXM5 330 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 GDF6Q6KF10 455 aaPredicted RBP21.79■■□□□ 1.08
CLN6-221ENST00000637494 RASEFQ8IZ41 740 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 AFAP1L1Q8TED9 768 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 FTOQ9C0B1 505 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLN6-221ENST00000637494 HDAC6Q9UBN7 1215 aa21.79■■□□□ 1.08
CLN6-221ENST00000637494 GOLGA8AA7E2F4 631 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 GOLGA8BA8MQT2 603 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 IQCF3P0C7M6 154 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
CLN6-221ENST00000637494 ADCK5Q3MIX3 580 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 GIMAP8Q8ND71 665 aaPredicted RBP21.78■■□□□ 1.08
CLN6-221ENST00000637494 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 PBX4Q9BYU1 374 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 ZNF576Q9H609 170 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 CXXC1Q9P0U4 656 aaPredicted RBP21.78■■□□□ 1.08
CLN6-221ENST00000637494 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
CLN6-221ENST00000637494 KLF18A0A0U1RQI7 1052 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 hCG_1642624A0A1W2PR95 340 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 GRXCR1A8MXD5 290 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 SPATA31C2B4DYI2 1134 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 HAS3O00219 553 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 PARNO95453 639 aaKnown RBP21.77■■□□□ 1.08
CLN6-221ENST00000637494 FOSL2P15408 326 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 MYLIPQ8WY64 445 aa21.77■■□□□ 1.08
CLN6-221ENST00000637494 GPKOWQ92917 476 aaPredicted RBP eCLIP21.77■■□□□ 1.08
CLN6-221ENST00000637494 CCDC196A0A1B0GTZ2 297 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 RCAN1P53805 252 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 NAPAP54920 295 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 PTK7Q13308 1070 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 BLOC1S2Q6QNY1 142 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 CYFIP1Q7L576 1253 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
CLN6-221ENST00000637494 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
CLN6-221ENST00000637494 USP26Q9BXU7 913 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
CLN6-221ENST00000637494 H3BRB1 525 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 SELPP16109 830 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 PSMA5P28066 241 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 PPP1R18Q6NYC8 613 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 GPRASP2Q96D09 838 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 SENP7Q9BQF6 1050 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 TUT1Q9H6E5 874 aaKnown RBP21.75■■□□□ 1.07
CLN6-221ENST00000637494 ZNF215Q9UL58 517 aaPredicted RBP21.75■■□□□ 1.07
CLN6-221ENST00000637494 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 CNTNAP5Q8WYK1 1306 aa21.75■■□□□ 1.07
CLN6-221ENST00000637494 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
CLN6-221ENST00000637494 HSPA4P34932 840 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 PBX2P40425 430 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 UBE2SQ16763 222 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 LRRC8DQ7L1W4 858 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 MAFAQ8NHW3 353 aaPredicted RBP21.74■■□□□ 1.07
CLN6-221ENST00000637494 GAS2L1Q99501 681 aaPredicted RBP21.74■■□□□ 1.07
CLN6-221ENST00000637494 C16orf70Q9BSU1 422 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 GLT8D2Q9H1C3 349 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
CLN6-221ENST00000637494 TANC1Q9C0D5 1861 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 BAIAP3O94812 1187 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms