RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SUN1O94901 812 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 HIBCHQ6NVY1 386 aaPredicted RBP17.31■□□□□ 0.36
CLN5-218ENST00000637397 GCKP35557 465 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 RASGRP2Q7LDG7 609 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 MIER3Q7Z3K6 550 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
CLN5-218ENST00000637397 ODF2LQ9ULJ1 636 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 CPDO75976 1380 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 PSMD2Q13200 908 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
CLN5-218ENST00000637397 SRLQ86TD4 932 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 RUNDC3BQ96NL0 473 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 FMO2Q99518 471 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 PLA2G4BP0C869 781 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 CD19P15391 556 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 HSPA1LP34931 641 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 RCAN1P53805 252 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
CLN5-218ENST00000637397 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 POTEMA6NI47 508 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 PRDX5P30044 214 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 KCNQ4P56696 695 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 TRPC3Q13507 836 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
CLN5-218ENST00000637397 REXO1L1PQ8IX06 675 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 TRIM10Q9UDY6 481 aa17.3■□□□□ 0.36
CLN5-218ENST00000637397 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 GLE1Q53GS7 698 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 RIN2Q8WYP3 895 aaPredicted RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 ZNF185O15231 689 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 GRIN1Q05586 938 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 FAM133BQ5BKY9 247 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 MYL7Q01449 175 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 ATF7P17544 494 aaPredicted RBP17.29■□□□□ 0.36
CLN5-218ENST00000637397 ICA1Q05084 483 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 ST3GAL1Q11201 340 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
CLN5-218ENST00000637397 ATF2P15336 505 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 PDE6CP51160 858 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 CPSF2Q9P2I0 782 aaKnown RBP17.28■□□□□ 0.36
CLN5-218ENST00000637397 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 NEXMIFQ5QGS0 1516 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 TROVE2P10155 538 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLN5-218ENST00000637397 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 SPATA4Q8NEY3 305 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 GRK7Q8WTQ7 553 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 SH3GLB2Q9NR46 395 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
CLN5-218ENST00000637397 PEX19P40855 299 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 IWS1Q96ST2 819 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 CAPN11Q9UMQ6 739 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 A0A1W2PQC6 194 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 N4BP1O75113 896 aaKnown RBP17.28■□□□□ 0.36
CLN5-218ENST00000637397 FAM102BQ5T8I3 360 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 CTAGE3PQ8IX95 158 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 KLHL29Q96CT2 875 aa17.28■□□□□ 0.36
CLN5-218ENST00000637397 ADGRB1O14514 1584 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 FGGP02679 453 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 SNX1Q13596 522 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 ARMC9Q7Z3E5 817 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 KIAA0825Q8IV33 1275 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 ARHGAP24Q8N264 748 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 NOA1Q8NC60 698 aaKnown RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 RAB3IPQ96QF0 476 aaPredicted RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 TYW1Q9NV66 732 aaKnown RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 TTLL1O95922 423 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 CUL1Q13616 776 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 P3H4Q92791 437 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 PACSIN2Q9UNF0 486 aaPredicted RBP17.27■□□□□ 0.36
CLN5-218ENST00000637397 DLC1Q96QB1 1528 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 C10orf76Q5T2E6 689 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 LRRC1Q9BTT6 524 aa17.27■□□□□ 0.36
CLN5-218ENST00000637397 FCER1AP12319 257 aa17.27■□□□□ 0.35
CLN5-218ENST00000637397 SESN3P58005 492 aa17.27■□□□□ 0.35
CLN5-218ENST00000637397 MUM1Q2TAK8 710 aa17.27■□□□□ 0.35
CLN5-218ENST00000637397 TAB3Q8N5C8 712 aaPredicted RBP17.27■□□□□ 0.35
CLN5-218ENST00000637397 DCP1AQ9NPI6 582 aaPredicted RBP17.27■□□□□ 0.35
CLN5-218ENST00000637397 ZNF148Q9UQR1 794 aa17.27■□□□□ 0.35
CLN5-218ENST00000637397 COMMD10Q9Y6G5 202 aa17.27■□□□□ 0.35
CLN5-218ENST00000637397 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 POC1B-GALNT4F8VUJ3 575 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 GYPCP04921 128 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms