RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NLRX1Q86UT6 975 aa15.86■□□□□ 0.13
PNKP-228ENST00000637325 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
PNKP-228ENST00000637325 KATNAL1Q9BW62 490 aa15.86■□□□□ 0.13
PNKP-228ENST00000637325 EHMT1Q9H9B1 1298 aa15.86■□□□□ 0.13
PNKP-228ENST00000637325 ACRP10323 421 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 CYP2C9P11712 490 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 UBA1P22314 1058 aaKnown RBP15.85■□□□□ 0.13
PNKP-228ENST00000637325 CDC27P30260 824 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 SP2Q02086 613 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 NEDD9Q14511 834 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 UBE2SQ16763 222 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 PCNX4Q63HM2 1172 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 DEFB123Q8N688 67 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 ALG1Q9BT22 464 aa15.85■□□□□ 0.13
PNKP-228ENST00000637325 LAMA2P24043 3122 aaKnown RBP15.85■□□□□ 0.13
PNKP-228ENST00000637325 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 FIBPO43427 364 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 PPFIA4O75335 1185 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 ICAM3P32942 547 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 ADD1P35611 737 aaKnown RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 PSEN2P49810 448 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 ADCY7P51828 1080 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 PPP1R18Q6NYC8 613 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 PSRC1Q6PGN9 363 aaPredicted RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 RPUSD2Q8IZ73 545 aaKnown RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 ZNF713Q8N859 430 aaPredicted RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 C7orf31Q8N865 590 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 RETREG2Q8NC44 543 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 KAT2BQ92831 832 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 INPP4AQ96PE3 977 aaPredicted RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.131e-11■■■□□ 14.6
PNKP-228ENST00000637325 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 IL23AQ9NPF7 189 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
PNKP-228ENST00000637325 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 UMODL1Q5DID0 1318 aa15.84■□□□□ 0.13
PNKP-228ENST00000637325 TET1Q8NFU7 2136 aa15.83■□□□□ 0.13
PNKP-228ENST00000637325 SPATA31C2B4DYI2 1134 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 AKAP17AQ02040 695 aaKnown RBP15.83■□□□□ 0.12
PNKP-228ENST00000637325 FUT2Q10981 343 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 MFSD10Q14728 455 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 PTGISQ16647 500 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 HSDL1Q3SXM5 330 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 TMEM240Q5SV17 173 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 ZNF365Q70YC5 407 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 RUFY3Q7L099 469 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 Q7L0L9 218 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 CYFIP1Q7L576 1253 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
PNKP-228ENST00000637325 GBF1Q92538 1859 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 SMCO2A6NFE2 343 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 STXBP3O00186 592 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 FGBP02675 491 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 SMAD3P84022 425 aaKnown RBP15.82■□□□□ 0.12
PNKP-228ENST00000637325 BFSP2Q13515 415 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 ZNF697Q5TEC3 545 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 C16orf59Q7L2K0 433 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 SESTD1Q86VW0 696 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 FBXL16Q8N461 479 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 SCLYQ96I15 445 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 MTIF3Q9H2K0 278 aaKnown RBP15.82■□□□□ 0.12
PNKP-228ENST00000637325 ZSWIM6Q9HCJ5 1215 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 RIC8AQ9NPQ8 531 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 HDAC6Q9UBN7 1215 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
PNKP-228ENST00000637325 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 F2P00734 622 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 FOSP01100 380 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 SEMA3FQ13275 785 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 GDF6Q6KF10 455 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 METTL7BQ6UX53 244 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 TEX2Q8IWB9 1127 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 GIMAP8Q8ND71 665 aaPredicted RBP15.81■□□□□ 0.12
PNKP-228ENST00000637325 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 SENP7Q9BQF6 1050 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 AGXT2Q9BYV1 514 aa15.81■□□□□ 0.12
PNKP-228ENST00000637325 HOXD8P13378 290 aaPredicted RBP15.8■□□□□ 0.12
PNKP-228ENST00000637325 SCG2P13521 617 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
PNKP-228ENST00000637325 SP4Q02446 784 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 FAM109BQ6ICB4 259 aaPredicted RBP15.8■□□□□ 0.12
PNKP-228ENST00000637325 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 DEFB128Q7Z7B8 93 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 CCDC12Q8WUD4 166 aaPredicted RBP15.8■□□□□ 0.12
PNKP-228ENST00000637325 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 BCAS3Q9H6U6 928 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 GTF2IRD1Q9UHL9 959 aa15.8■□□□□ 0.12
PNKP-228ENST00000637325 MYH9P35579 1960 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms