RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 WDR5P61964 334 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADAM17P78536 824 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RBM10P98175 930 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 SP4Q02446 784 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 DLX2Q07687 328 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PDE4DQ08499 809 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TROAPQ12815 778 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 GRB10Q13322 594 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PPIGQ13427 754 aaKnown RBP eCLIP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 MKRN4PQ13434 485 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 GRM4Q14833 912 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PGM5Q15124 567 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PTGISQ16647 500 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 UBE2SQ16763 222 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TKFCQ3LXA3 575 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADCK5Q3MIX3 580 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZNF618Q5T7W0 954 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 MYSM1Q5VVJ2 828 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TYW1BQ6NUM6 668 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 USP17L6PQ6QN14 398 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 POTEBQ6S5H4 581 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RUFY4Q6ZNE9 571 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RTN4RL1Q86UN2 441 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 VSIG10LQ86VR7 867 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 FCHSD1Q86WN1 690 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 FBXO11Q86XK2 927 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 HOMER1Q86YM7 354 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 MB21D2Q8IYB1 491 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RASEFQ8IZ41 740 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 CCDC82Q8N4S0 544 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM199Q8N511 208 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 SRBD1Q8N5C6 995 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 MSL3Q8N5Y2 521 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PCSK9Q8NBP7 692 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 DBF4BQ8NFT6 615 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 CYP2W1Q8TAV3 490 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 IGDCC4Q8TDY8 1250 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 GDPD5Q8WTR4 605 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 NUP133Q8WUM0 1156 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TRAPPC12Q8WVT3 735 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 LINC01599Q8WXQ3 324 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ARNTL2Q8WYA1 636 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 GPATCH3Q96I76 525 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZSCAN10Q96SZ4 725 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RMDN3Q96TC7 470 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PCYT2Q99447 389 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PDCD2LQ9BRP1 358 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 LARP6Q9BRS8 491 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 C17orf80Q9BSJ5 609 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 C16orf70Q9BSU1 422 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 MTG1Q9BT17 334 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 NACAP1Q9BZK3 213 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 LSG1Q9H089 658 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RNPEPQ9H4A4 650 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RIOX1Q9H6W3 641 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 CDHR5Q9HBB8 845 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 VTA1Q9NP79 307 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 C11orf16Q9NQ32 467 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PXMP2Q9NR77 195 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM260Q9NX78 707 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 RTEL1Q9NZ71 1219 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PKD2L1Q9P0L9 805 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 FBXO40Q9UH90 709 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 CTDP1Q9Y5B0 961 aaPredicted RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 PCDHGC5Q9Y5F6 944 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 SLC4A7Q9Y6M7 1214 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TNRC6BQ9UPQ9 1833 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 USP34Q70CQ2 3546 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM131Q92545 1883 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 NYNRINQ9P2P1 1898 aaKnown RBP1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ABCB11O95342 1321 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZMYM6O95789 1325 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 WDR19Q8NEZ3 1342 aa1.88□□□□□ -2.11
SYNGAP1-216ENST00000636640 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZDBF2Q9HCK1 2354 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 THADAQ6YHU6 1953 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PI4KAP42356 2102 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LINC01553A4QN01 128 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TNFRSF10AO00220 468 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZNF213O14771 459 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 IFIT3O14879 490 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SLC27A2O14975 620 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GRM6O15303 877 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TLR3O15455 904 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LINC01565O15544 149 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SGSM2O43147 1006 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DHX16O60231 1041 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MGEA5O60502 916 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 UPP2O95045 317 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CSPG5O95196 566 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 F2P00734 622 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GH1P01241 217 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CHRNA1P02708 482 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LGALS2P05162 132 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SLC3A2P08195 630 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CTSHP09668 335 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PARP1P09874 1014 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SMIM10L2AP0DMW4 78 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SMIM10L2BP0DMW5 78 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 FDX1P10109 184 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms