RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 SLC37A4O43826 429 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
CTSD-207ENST00000636571 SMPD1P17405 629 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 CEP55Q53EZ4 464 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 PRR16Q569H4 304 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 ARMC5Q96C12 935 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 CCNT1O60563 726 aaKnown RBP17.63■□□□□ 0.41
CTSD-207ENST00000636571 ATP9AO75110 1047 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 CCL5P13501 91 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 MYH15Q9Y2K3 1946 aa17.63■□□□□ 0.41
CTSD-207ENST00000636571 POTEFA5A3E0 1075 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 MEIS1O00470 390 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 CIITAP33076 1130 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 USP11P51784 963 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
CTSD-207ENST00000636571 MTMR1Q13613 665 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.413e-9■■■■■ 28.2
CTSD-207ENST00000636571 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
CTSD-207ENST00000636571 KCNH7Q9NS40 1196 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 MRVI1Q9Y6F6 885 aa17.62■□□□□ 0.41
CTSD-207ENST00000636571 RBM47A0AV96 593 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 SEPT4O43236 478 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 TXNP10599 105 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 ZNF174Q15697 407 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 SCFD2Q8WU76 684 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
CTSD-207ENST00000636571 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 KIAA0100Q14667 2235 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 SPATA31C2B4DYI2 1134 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 AKR1A1P14550 325 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 MCM7P33993 719 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 TNFAIP2Q03169 654 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 DDX25Q9UHL0 483 aaKnown RBP17.61■□□□□ 0.41
CTSD-207ENST00000636571 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 FAM184BQ9ULE4 1060 aa17.61■□□□□ 0.41
CTSD-207ENST00000636571 CYP3A7-CYP3A51PA0A087WV96 503 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 FIBPO43427 364 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 STAM2O75886 525 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 CYP3A7P24462 503 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 ICAM3P32942 547 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 ITGB3BPQ13352 177 aaPredicted RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 GNPTABQ3T906 1256 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 TTC38Q5R3I4 469 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 NLRX1Q86UT6 975 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 GPRASP2Q96D09 838 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 MBOAT7Q96N66 472 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
CTSD-207ENST00000636571 PAK6Q9NQU5 681 aaPredicted RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 GNEQ9Y223 722 aaKnown RBP17.6■□□□□ 0.41
CTSD-207ENST00000636571 MSH4O15457 936 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 KCNA2P16389 499 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
CTSD-207ENST00000636571 TTLL4Q14679 1199 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 LHX8Q68G74 356 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 IQSEC1Q6DN90 963 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 AGO4Q9HCK5 861 aaKnown RBP17.59■□□□□ 0.41
CTSD-207ENST00000636571 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
CTSD-207ENST00000636571 MYADML2A6NDP7 307 aa17.58■□□□□ 0.41
CTSD-207ENST00000636571 DDX39AO00148 427 aaKnown RBP17.58■□□□□ 0.41
CTSD-207ENST00000636571 PGK1P00558 417 aa17.58■□□□□ 0.41
CTSD-207ENST00000636571 Q4G0T1 1027 aa17.58■□□□□ 0.41
CTSD-207ENST00000636571 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.41
CTSD-207ENST00000636571 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.41
CTSD-207ENST00000636571 DYNC1LI2O43237 492 aaPredicted RBP17.58■□□□□ 0.4
CTSD-207ENST00000636571 GGPS1O95749 300 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 SP4Q02446 784 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 BRAPQ7Z569 592 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 TLK2Q86UE8 772 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 ETNPPLQ8TBG4 499 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 HAS1Q92839 578 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 ZNF577Q9BSK1 485 aa17.58■□□□□ 0.4
CTSD-207ENST00000636571 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
CTSD-207ENST00000636571 SYNRGQ9UMZ2 1314 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
CTSD-207ENST00000636571 BEX3Q00994 111 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 ARHGAP1Q07960 439 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 NIPA1Q7RTP0 329 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 GBP4Q96PP9 640 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 TCHHQ07283 1943 aa17.57■□□□□ 0.4
CTSD-207ENST00000636571 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms