RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 ACTR5Q9H9F9 607 aaPredicted RBP8.52□□□□□ -1.05
SSRP1-205ENST00000635721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.52□□□□□ -1.05
SSRP1-205ENST00000635721 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 TOMM22Q9NS69 142 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 PI4KBQ9UBF8 816 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 REXO2Q9Y3B8 237 aaKnown RBP8.52□□□□□ -1.05
SSRP1-205ENST00000635721 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.05
SSRP1-205ENST00000635721 PHIPQ8WWQ0 1821 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 ATP8B3O60423 1300 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 PITPNM2Q9BZ72 1349 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 OTOFQ9HC10 1997 aa8.52□□□□□ -1.05
SSRP1-205ENST00000635721 TRIM75PA6NK02 468 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 N4BP3O15049 544 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 PRPF3O43395 683 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 RANBP6O60518 1105 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 NMT2O60551 498 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 GDF11O95390 407 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 HLA-DOAP06340 250 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 RHOXF2BP0C7M4 288 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 KRT9P35527 623 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 GGCXP38435 758 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 ZBED6P86452 979 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 GOLGA8FQ08AF8 430 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 GOLGA8DPQ0D2H9 430 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 E2F4Q16254 413 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 TSR1Q2NL82 804 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 PREPLQ4J6C6 727 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 ISM2Q6H9L7 571 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 C6orf89Q6UWU4 347 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 MFSD6Q6ZSS7 791 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 CCDC84Q86UT8 332 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 DIS3L2Q8IYB7 885 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 CDCA5Q96FF9 252 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 RHOXF2Q9BQY4 288 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 EPN3Q9H201 632 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 DHX36Q9H2U1 1008 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 GPBP1L1Q9HC44 474 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 IL17RBQ9NRM6 502 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 SERPINB13Q9UIV8 391 aa8.51□□□□□ -1.05
SSRP1-205ENST00000635721 LUC7L2Q9Y383 392 aaKnown RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-205ENST00000635721 ROBO3Q96MS0 1386 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 GOLGA8AA7E2F4 631 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 BTBD18B2RXH4 712 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 BHMG1C9JSJ3 638 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 FOXN1O15353 648 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 TBC1D12O60347 775 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 RASSF9O75901 435 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 ITGBL1O95965 494 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 GUCY1A2P33402 732 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 ATP2C1P98194 919 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 TFAP4Q01664 338 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 IFFO1Q0D2I5 559 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 PAK1Q13153 545 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 TNFAIP1Q13829 316 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SART3Q15020 963 aaKnown RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 LACTB2Q53H82 288 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SPDYCQ5MJ68 293 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 TATDN1Q6P1N9 297 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 KCNV1Q6PIU1 500 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 LRIG3Q6UXM1 1119 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 CLEC10AQ8IUN9 316 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 ARFGAP2Q8N6H7 521 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 MB21D1Q8N884 522 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 BCAS4Q8TDM0 211 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 TNFRSF25Q93038 417 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 DHTKD1Q96HY7 919 aaPredicted RBP8.5□□□□□ -1.05
SSRP1-205ENST00000635721 ERGIC2Q96RQ1 377 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 MMS19Q96T76 1030 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 EHD4Q9H223 541 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 CUEDC2Q9H467 287 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SNX12Q9UMY4 172 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 SLC12A7Q9Y666 1083 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 PAPPA2Q9BXP8 1791 aa8.5□□□□□ -1.05
SSRP1-205ENST00000635721 DOCK1Q14185 1865 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 GRID2IPA4D2P6 1211 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 HMGB1P1B2RPK0 211 aaPredicted RBP8.49□□□□□ -1.05
SSRP1-205ENST00000635721 ORC4O43929 436 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 PAEPP09466 180 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 VAV2P52735 878 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 HERVK_113P62684 666 aa8.49□□□□□ -1.05
SSRP1-205ENST00000635721 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
SSRP1-205ENST00000635721 NEDD9Q14511 834 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms