RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 A6NJR5 290 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 FIBPO43427 364 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 GH1P01241 217 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 ASGR1P07306 291 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 GNPTABQ3T906 1256 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 EMID1Q96A84 441 aaPredicted RBP11.12□□□□□ -0.63
LINC00339-210ENST00000635675 FERMT2Q96AC1 680 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 TMX3Q96JJ7 454 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 JADE2Q9NQC1 790 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
LINC00339-210ENST00000635675 MEIS1O00470 390 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 MAFGO15525 162 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 EDIL3O43854 480 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 CYP3A4P08684 503 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 XBP1P17861 261 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
LINC00339-210ENST00000635675 CPT1AP50416 773 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 ARHGAP4P98171 946 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 SNX17Q15036 470 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 LRRC26Q2I0M4 334 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
LINC00339-210ENST00000635675 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 SLC39A5Q6ZMH5 540 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 CYP2W1Q8TAV3 490 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 MXRA8Q9BRK3 442 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 MYH7BA7E2Y1 1941 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 ELP1O95163 1332 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
LINC00339-210ENST00000635675 ZEB2O60315 1214 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 ATP9AO75110 1047 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 GGPS1O95749 300 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-210ENST00000635675 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
LINC00339-210ENST00000635675 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
LINC00339-210ENST00000635675 MTMR1Q13613 665 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 NEDD9Q14511 834 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-210ENST00000635675 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
LINC00339-210ENST00000635675 AFG1LQ8WV93 481 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 DPF3Q92784 378 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 CDHR1Q96JP9 859 aa11.1□□□□□ -0.63
LINC00339-210ENST00000635675 FAM86B1E9PN63 330 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 KPNA6O60684 536 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 CABYRO75952 493 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 MMP3P08254 477 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 FAM86B2P0C5J1 330 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-210ENST00000635675 KCNA2P16389 499 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 CIITAP33076 1130 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 USP11P51784 963 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 PPTC7Q8NI37 304 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 GLT1D1Q96MS3 346 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 KCNH7Q9NS40 1196 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 IGLV3-22A0A075B6J6 115 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 EVI5O60447 810 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 SORBS3O60504 671 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 MMP1P03956 469 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 MYL3P08590 195 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 ARP10275 920 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 ZNF76P36508 570 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 CDK7P50613 346 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 KRT40Q6A162 431 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 METTL7BQ6UX53 244 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 CYFIP1Q7L576 1253 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-210ENST00000635675 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
LINC00339-210ENST00000635675 DOCK5Q9H7D0 1870 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 DNAH12Q6ZR08 3092 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 ARVCFO00192 962 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 KRT2P35908 639 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 RTP1P59025 263 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 NR5A1Q13285 461 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 TRIM29Q14134 588 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms