RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 NCOA5Q9HCD5 579 aaKnown RBP17.99■□□□□ 0.47
LINC00339-207ENST00000634712 TRIOBPQ9H2D6 2365 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 FIBPO43427 364 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 IFNAR1P17181 557 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 STK3Q13188 491 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 NEDD9Q14511 834 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 ANKRD1Q15327 319 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 NBPF20Q3BBV1 942 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 TYW1BQ6NUM6 668 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 TDHQ8IZJ6 230 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 INPP4AQ96PE3 977 aaPredicted RBP17.98■□□□□ 0.47
LINC00339-207ENST00000634712 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
LINC00339-207ENST00000634712 C6orf50Q9HD87 102 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
LINC00339-207ENST00000634712 SPATA31C2B4DYI2 1134 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 TIMP1P01033 207 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 SUPT20HL2P0C7V6 817 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
LINC00339-207ENST00000634712 ICAM3P32942 547 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 SP2Q02086 613 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
LINC00339-207ENST00000634712 CDHR1Q96JP9 859 aa17.97■□□□□ 0.47
LINC00339-207ENST00000634712 MYH7BA7E2Y1 1941 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 NOP56O00567 594 aaKnown RBP17.96■□□□□ 0.47
LINC00339-207ENST00000634712 PPFIA4O75335 1185 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 SEC24BO95487 1268 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 CD4P01730 458 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 GNA11P29992 359 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 NTRK3Q16288 839 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 NFRKBQ6P4R8 1299 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 TRPV6Q9H1D0 765 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 ALDH8A1Q9H2A2 487 aaPredicted RBP17.96■□□□□ 0.47
LINC00339-207ENST00000634712 SLKQ9H2G2 1235 aaPredicted RBP17.96■□□□□ 0.47
LINC00339-207ENST00000634712 TBX21Q9UL17 535 aa17.96■□□□□ 0.47
LINC00339-207ENST00000634712 B4GALT4O60513 344 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 ITGB8P26012 769 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 FPGSQ05932 587 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 PTPN11Q06124 597 aaPredicted RBP17.95■□□□□ 0.46
LINC00339-207ENST00000634712 PKN1Q16512 942 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 CYFIP1Q7L576 1253 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 GIMAP8Q8ND71 665 aaPredicted RBP17.95■□□□□ 0.46
LINC00339-207ENST00000634712 CCDC148Q8NFR7 591 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
LINC00339-207ENST00000634712 RANBP2P49792 3224 aaKnown RBP17.94■□□□□ 0.46
LINC00339-207ENST00000634712 ZNF76P36508 570 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 FXR1P51114 621 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC00339-207ENST00000634712 MTMR1Q13613 665 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 HSDL1Q3SXM5 330 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 METTL7BQ6UX53 244 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 TMEM199Q8N511 208 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 BICD2Q8TD16 824 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 PGBD1Q96JS3 809 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 SENP7Q9BQF6 1050 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 ANO3Q9BYT9 981 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 ZMYND12Q9H0C1 365 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 HIPK3Q9H422 1215 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 TMEM260Q9NX78 707 aa17.94■□□□□ 0.46
LINC00339-207ENST00000634712 ESYT2A0FGR8 921 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 MAFGO15525 162 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 CDKL5O76039 1030 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 PSEN2P49810 448 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 NEK4P51957 841 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 C7orf31Q8N865 590 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 PPP1R13LQ8WUF5 828 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 ALG1Q9BT22 464 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 JADE2Q9NQC1 790 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 TRMT13Q9NUP7 481 aaKnown RBP17.93■□□□□ 0.46
LINC00339-207ENST00000634712 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
LINC00339-207ENST00000634712 DEXIO95424 95 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 ZNF286BP0CG31 522 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 ITGB5P18084 799 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 CLK2P49760 499 aaKnown RBP17.92■□□□□ 0.46
LINC00339-207ENST00000634712 AK2P54819 239 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 NLRP5P59047 1200 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 SP4Q02446 784 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00339-207ENST00000634712 MFSD10Q14728 455 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 REXO1Q8N1G1 1221 aaKnown RBP17.92■□□□□ 0.46
LINC00339-207ENST00000634712 KAT2BQ92831 832 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 MXRA8Q9BRK3 442 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 SH3GLB2Q9NR46 395 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 VPS54Q9P1Q0 977 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 TPCN1Q9ULQ1 816 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 SCN10AQ9Y5Y9 1956 aa17.92■□□□□ 0.46
LINC00339-207ENST00000634712 CYP2C18P33260 490 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 KIAA0753Q2KHM9 967 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 BCAS3Q9H6U6 928 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms