RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 RNF41Q9H4P4 317 aaPredicted RBP15.03■□□□□ -0
LINC00339-206ENST00000634451 SENP2Q9HC62 589 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 PNMA2Q9UL42 364 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 COG5Q9UP83 839 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 ATG2AQ2TAZ0 1938 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 IGHDP01880 384 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
LINC00339-206ENST00000634451 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
LINC00339-206ENST00000634451 HSD17B4P51659 736 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 ERVK-21P61565 698 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 ASPRV1Q53RT3 343 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 CYB5R4Q7L1T6 521 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 CCDC155Q8N6L0 562 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 DBF4BQ8NFT6 615 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 PPTC7Q8NI37 304 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 PDCD2LQ9BRP1 358 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 C1QTNF1Q9BXJ1 281 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
LINC00339-206ENST00000634451 B4DLN1 442 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 LGR5O75473 907 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 GGPS1O95749 300 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 PCP11498 1178 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 HOXD8P13378 290 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 IL9P15248 144 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 MRPL12P52815 198 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 PTK7Q13308 1070 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 EMID1Q96A84 441 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 SPATA33Q96N06 139 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 RAD9AQ99638 391 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 C16orf70Q9BSU1 422 aa15.01□□□□□ -0.01
LINC00339-206ENST00000634451 UBE2ZQ9H832 354 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
LINC00339-206ENST00000634451 ABHD14A-ACY1A0A1B0GW23 586 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
LINC00339-206ENST00000634451 CTSHP09668 335 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 KCNA5P22460 613 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 THPOP40225 353 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 LAMC2Q13753 1193 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 PGM5Q15124 567 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 SEC23AQ15436 765 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 CELF3Q5SZQ8 465 aaKnown RBP15□□□□□ -0.01
LINC00339-206ENST00000634451 IQCA1Q86XH1 822 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 TRIM50Q86XT4 487 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 HOMER1Q86YM7 354 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 GADD45GIP1Q8TAE8 222 aaPredicted RBP15□□□□□ -0.01
LINC00339-206ENST00000634451 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
LINC00339-206ENST00000634451 TREHO43280 583 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 IKBKEQ14164 716 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 TMEM31Q5JXX7 168 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 FCHSD1Q86WN1 690 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 MTMR8Q96EF0 704 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 PIGSQ96S52 555 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
LINC00339-206ENST00000634451 NLRC5Q86WI3 1866 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-206ENST00000634451 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 H3BQ06 376 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-206ENST00000634451 CYTH3O43739 400 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-206ENST00000634451 GHRHRQ02643 423 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 SEMA3FQ13275 785 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 FBXO22Q8NEZ5 403 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
LINC00339-206ENST00000634451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-206ENST00000634451 RSPH10B2B2RC85 870 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 ZBTB5O15062 677 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 UPP2O95045 317 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 LGALS2P05162 132 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 RSPH10BP0C881 870 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-206ENST00000634451 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
LINC00339-206ENST00000634451 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 UBAC1Q9BSL1 405 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
LINC00339-206ENST00000634451 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-206ENST00000634451 CSPG5O95196 566 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 HOXC8P31273 242 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
LINC00339-206ENST00000634451 SP4Q02446 784 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 NUCB1Q02818 461 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms