RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 KIAA0232Q92628 1395 aa12.75□□□□□ -0.37
SHPRH-211ENST00000629427 AFPP02771 609 aaKnown RBP12.75□□□□□ -0.37
SHPRH-211ENST00000629427 KRT10P13645 584 aa12.75□□□□□ -0.37
SHPRH-211ENST00000629427 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
SHPRH-211ENST00000629427 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
SHPRH-211ENST00000629427 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
SHPRH-211ENST00000629427 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 EPHB1P54762 984 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GNGT1P63211 74 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 PDXDC2PQ6P474 469 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 FAM186BQ8IYM0 893 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 COA7Q96BR5 231 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GOLGA8QA0A0J9YX86 632 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GOLGA8OA6NCC3 632 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GOLGA8NF8WBI6 632 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GNGT2O14610 69 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GDAP1Q8TB36 358 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 TBCKQ8TEA7 893 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 CALN1Q9BXU9 219 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 SERPINB13Q9UIV8 391 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 CFAP61Q8NHU2 1237 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 MYL3P08590 195 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ARL4AP40617 200 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 GUCY2DQ02846 1103 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 DARS2Q6PI48 645 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 WHAMMQ8TF30 809 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 PCDHA7Q9UN72 937 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ABCC2Q92887 1545 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 STMN1P16949 149 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 LLGL1Q15334 1064 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 KANSL2Q9H9L4 492 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 RCN2Q14257 317 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 LRRC41Q15345 812 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 HEXIM2Q96MH2 286 aaKnown RBP12.74□□□□□ -0.37
SHPRH-211ENST00000629427 MAGEF1Q9HAY2 307 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 EPS15L1Q9UBC2 864 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 FAM8A1Q9UBU6 413 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
SHPRH-211ENST00000629427 SART1O43290 800 aaKnown RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 BBOX1O75936 387 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 LRRC8AQ8IWT6 810 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 EFCAB13Q8IY85 973 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 Q9H521 79 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SPECC1L-ADORA2AF8WAN1 911 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ZNF18P17022 549 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 PHLDB3Q6NSJ2 640 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 FOXP1Q9H334 677 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 CD58P19256 250 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ABCD1P33897 745 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SOX5P35711 763 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 DSTYKQ6XUX3 929 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ZFYVE16Q7Z3T8 1539 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 PMLP29590 882 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SNAP25P60880 206 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 BRD3Q15059 726 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SMYD4Q8IYR2 804 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 SIX6OS1Q8N1H7 587 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 AK8Q96MA6 479 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 TMEM206Q9H813 350 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 DDIT3P35638 169 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-211ENST00000629427 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 PSAPP07602 524 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 ELMSAN1Q6PJG2 1045 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 FGD4Q96M96 766 aa12.73□□□□□ -0.37
SHPRH-211ENST00000629427 FOXD4Q12950 439 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 CFAP36Q96G28 342 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 GSTA4O15217 222 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 STX1BP61266 288 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 CDC26Q8NHZ8 85 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms