RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATRX-214ENST00000624166 KRT15P19012 456 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 SCARF1Q14162 830 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
ATRX-214ENST00000624166 CDKAL1Q5VV42 579 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 TBC1D1Q86TI0 1168 aaPredicted RBP12.9□□□□□ -0.34
ATRX-214ENST00000624166 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 GRK7Q8WTQ7 553 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 SPZ1Q9BXG8 430 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
ATRX-214ENST00000624166 C6orf229H3BNL8 230 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 FAM107AO95990 144 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
ATRX-214ENST00000624166 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
ATRX-214ENST00000624166 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 AFPP02771 609 aaKnown RBP12.89□□□□□ -0.35
ATRX-214ENST00000624166 MMEP08473 750 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 PRLRP16471 622 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 MAGOHP61326 146 aaKnown RBP12.89□□□□□ -0.35
ATRX-214ENST00000624166 KRT26Q7Z3Y9 468 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 NCK2O43639 380 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 NR2F2P24468 414 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 GYG1P46976 350 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 CHRNDQ07001 517 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
ATRX-214ENST00000624166 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 PHF20Q9BVI0 1012 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 BATF3Q9NR55 127 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
ATRX-214ENST00000624166 A0A1W2PQJ5 194 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 GJC1P36383 396 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 IL9RQ01113 521 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ARHGEF18Q6ZSZ5 1173 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 AP1M1Q9BXS5 423 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 EXOC3O60645 756 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 STAMBPO95630 424 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 DR1Q01658 176 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 KDM7AQ6ZMT4 941 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 GBP5Q96PP8 586 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 EYA3Q99504 573 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 CCSER1Q9C0I3 900 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 TECPR2O15040 1411 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 SARSP49591 514 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 GRIN1Q05586 938 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 LRRC41Q15345 812 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 TAF11Q15544 211 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 GUF1Q8N442 669 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 ELAC2Q9BQ52 826 aaKnown RBP12.88□□□□□ -0.35
ATRX-214ENST00000624166 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 THAP12O43422 761 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
ATRX-214ENST00000624166 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 MAN1A1P33908 653 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 PICALMQ13492 652 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 PDIA6Q15084 440 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 PTGISQ16647 500 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
ATRX-214ENST00000624166 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms