RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TCP11L1Q9NUJ3 509 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 HAUS2Q9NVX0 235 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 PACSIN2Q9UNF0 486 aaPredicted RBP15.55■□□□□ 0.08
LDB3-209ENST00000623056 H0YGN5 161 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 LAD1O00515 517 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 ORC4O43929 436 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 ECHS1P30084 290 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 HSPA1LP34931 641 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 TNNC1P63316 161 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 NAB2Q15742 525 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 MEI1Q5TIA1 1274 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 CEP57Q86XR8 500 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 VEZTQ9HBM0 779 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 NFS1Q9Y697 457 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 TMCO5BA8MYB1 307 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 SSBP05455 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-209ENST00000623056 ERCC3P19447 782 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 KIF5BP33176 963 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 ERVK-9P63128 1117 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 EHHADHQ08426 723 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-209ENST00000623056 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
LDB3-209ENST00000623056 EP400NLQ6ZTU2 488 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-209ENST00000623056 PIGBQ92521 554 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 SGSM3Q96HU1 749 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 AK8Q96MA6 479 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 ISCUQ9H1K1 167 aa15.54■□□□□ 0.08
LDB3-209ENST00000623056 SOCS7O14512 581 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 KLRC1P26715 233 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 TMOD1P28289 359 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 ZNF844Q08AG5 666 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 CCDC50Q8IVM0 306 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 MIEF2Q96C03 454 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 SEC16BQ96JE7 1060 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
LDB3-209ENST00000623056 LEMD3Q9Y2U8 911 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 PCDHGC5Q9Y5F6 944 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 ABCB11O95342 1321 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
LDB3-209ENST00000623056 CLGNO14967 610 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 AMPD3Q01432 767 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 BYSLQ13895 437 aaKnown RBP15.52■□□□□ 0.08
LDB3-209ENST00000623056 SLC9C1Q4G0N8 1177 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 MAGEC3Q8TD91 643 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 NLRC4Q9NPP4 1024 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 TMEM59LQ9UK28 342 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.08
LDB3-209ENST00000623056 NUP98P52948 1817 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 CACNA1SQ13698 1873 aa15.52■□□□□ 0.08
LDB3-209ENST00000623056 TLR2O60603 784 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 OR52Z1P0C646 297 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 CTNNA1P35221 906 aaKnown RBP15.52■□□□□ 0.07
LDB3-209ENST00000623056 SCTRP47872 440 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 KCNMA1Q12791 1236 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 BIRC3Q13489 604 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 EIF1ADQ8N9N8 165 aaKnown RBP15.52■□□□□ 0.07
LDB3-209ENST00000623056 FAM212AQ96EL1 285 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 SCLT1Q96NL6 688 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 SLIT2O94813 1529 aa15.52■□□□□ 0.07
LDB3-209ENST00000623056 C5orf60A6NFR6 353 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 BACH1O14867 736 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 SERPING1P05155 500 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 SFMBT2Q5VUG0 894 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 ZNF34Q8IZ26 560 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 CACNA2D3Q8IZS8 1091 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 STAG2Q8N3U4 1231 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 LRRC45Q96CN5 670 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 TANGO6Q9C0B7 1094 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 BCCIPQ9P287 314 aaKnown RBP eCLIP15.51■□□□□ 0.07
LDB3-209ENST00000623056 CNOT8Q9UFF9 292 aaKnown RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 ZBTB1Q9Y2K1 713 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 COL1A1P02452 1464 aaPredicted RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 CHRNDQ07001 517 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 CUL1Q13616 776 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 LACTB2Q53H82 288 aaPredicted RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 RUFY4Q6ZNE9 571 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 ZNF384Q8TF68 577 aa15.51■□□□□ 0.07
LDB3-209ENST00000623056 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.51■□□□□ 0.07
LDB3-209ENST00000623056 PPP2R2AP63151 447 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 ODF2Q5BJF6 829 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 HEATR3Q7Z4Q2 680 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 DDX42Q86XP3 938 aaKnown RBP eCLIP15.5■□□□□ 0.07
LDB3-209ENST00000623056 RAPGEF5Q92565 580 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 MMTAG2Q9BU76 263 aaKnown RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 CEP72Q9P209 647 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 A0A1B0GUL6 1792 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 CASZ1Q86V15 1759 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 TSPY2A6NKD2 308 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 NOL4O94818 638 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 PAEPP09466 180 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms