RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 CYTH3O43739 400 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 PLA2G6O60733 806 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 PPP1R11O60927 126 aaPredicted RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 PLEKHA8P1O95397 391 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 TOP1P11387 765 aaKnown RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 GGCXP38435 758 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 GJA9P57773 515 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 MSS51Q4VC12 460 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 MUM1L1Q5H9M0 696 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 CASC1Q6TDU7 716 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 TLK2Q86UE8 772 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 FBXO16Q8IX29 292 aaPredicted RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 FAM133AQ8N9E0 248 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 KLHDC9Q8NEP7 349 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 TOX2Q96NM4 488 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 KRT23Q9C075 422 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 CNNM2Q9H8M5 875 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 ADD3Q9UEY8 706 aaKnown RBP6.83□□□□□ -1.32
LINC00963-215ENST00000622972 MAD2L2Q9UI95 211 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 MYH7BA7E2Y1 1941 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 KIAA1217Q5T5P2 1943 aa6.83□□□□□ -1.32
LINC00963-215ENST00000622972 WDR19Q8NEZ3 1342 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 MYH15Q9Y2K3 1946 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ARVCFO00192 962 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 IFIT3O14879 490 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ADCY6O43306 1168 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 DHX16O60231 1041 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 AP1G2O75843 785 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 TIMP1P01033 207 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ICAM1P05362 532 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CALML3P27482 149 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CST5P28325 142 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CDC27P30260 824 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 SMAD3P84022 425 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ZNF543Q08ER8 600 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 FAAP100Q0VG06 881 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 PPIGQ13427 754 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 GRM4Q14833 912 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 IQSEC1Q6DN90 963 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 FAM109BQ6ICB4 259 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 APOA5Q6Q788 366 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CXCL17Q6UXB2 119 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 Q6ZUG5 572 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 RUFY3Q7L099 469 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ANKRD33Q7Z3H0 272 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 RALYLQ86SE5 291 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 SGMS1Q86VZ5 419 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ZNF654Q8IZM8 581 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CMTR1Q8N1G2 835 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 TMEM199Q8N511 208 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 FAM160A2Q8N612 972 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 FGD4Q96M96 766 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 C22orf23Q9BZE7 217 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 TM6SF1Q9BZW5 370 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 CYP39A1Q9NYL5 469 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 PNMA2Q9UL42 364 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 DDX49Q9Y6V7 483 aaKnown RBP6.82□□□□□ -1.32
LINC00963-215ENST00000622972 WDR81Q562E7 1941 aa6.82□□□□□ -1.32
LINC00963-215ENST00000622972 ASTN1O14525 1302 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 CNTNAP5Q8WYK1 1306 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 B4DLN1 442 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 CFAP99D6REC4 459 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 NFIBO00712 420 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 OPLAHO14841 1288 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 CABYRO75952 493 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 MYL3P08590 195 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 SMPD1P17405 629 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 JUNDP17535 347 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 ITGB8P26012 769 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 MCM5P33992 734 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 ALDH5A1P51649 535 aaPredicted RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 MRPL12P52815 198 aaKnown RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 EPHB4P54760 987 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 AK2P54819 239 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 EVCP57679 992 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 CHMP4BP1P59074 171 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 ANAPC15P60006 121 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 ITGA7Q13683 1181 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 WTAPQ15007 396 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 FSCN1Q16658 493 aaKnown RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 USH1GQ495M9 461 aa6.81□□□□□ -1.32
LINC00963-215ENST00000622972 BRDTQ58F21 947 aaPredicted RBP6.81□□□□□ -1.32
LINC00963-215ENST00000622972 CCDC178Q5BJE1 867 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms