RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 METAP2P50579 478 aaKnown RBP eCLIP24.31■■□□□ 1.48
PMPCA-212ENST00000622209 TOB2Q14106 344 aaPredicted RBP24.31■■□□□ 1.48
PMPCA-212ENST00000622209 RAB30Q15771 203 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 STXBP2Q15833 593 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 ARHGEF16Q5VV41 709 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 CMTR1Q8N1G2 835 aaKnown RBP24.31■■□□□ 1.48
PMPCA-212ENST00000622209 SAMD3Q8N6K7 520 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 IWS1Q96ST2 819 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 SEC63Q9UGP8 760 aaKnown RBP24.31■■□□□ 1.48
PMPCA-212ENST00000622209 SLC4A7Q9Y6M7 1214 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 CHD9Q3L8U1 2897 aa24.31■■□□□ 1.48
PMPCA-212ENST00000622209 NID2Q14112 1375 aa24.3■■□□□ 1.48
PMPCA-212ENST00000622209 RABGGTBP53611 331 aa24.3■■□□□ 1.48
PMPCA-212ENST00000622209 NFRKBQ6P4R8 1299 aa24.3■■□□□ 1.48
PMPCA-212ENST00000622209 USP38Q8NB14 1042 aa24.3■■□□□ 1.48
PMPCA-212ENST00000622209 PPM1EQ8WY54 764 aa24.3■■□□□ 1.48
PMPCA-212ENST00000622209 FAM217BQ9NTX9 383 aaPredicted RBP24.3■■□□□ 1.48
PMPCA-212ENST00000622209 MAP3K20Q9NYL2 800 aaKnown RBP24.3■■□□□ 1.48
PMPCA-212ENST00000622209 YBX2Q9Y2T7 364 aaKnown RBP24.3■■□□□ 1.48
PMPCA-212ENST00000622209 GH1P01241 217 aa24.29■■□□□ 1.48
PMPCA-212ENST00000622209 CCDC82Q8N4S0 544 aa24.29■■□□□ 1.48
PMPCA-212ENST00000622209 PIBF1Q8WXW3 757 aa24.29■■□□□ 1.48
PMPCA-212ENST00000622209 ZNF274Q96GC6 653 aaPredicted RBP24.29■■□□□ 1.48
PMPCA-212ENST00000622209 GAS2L1Q99501 681 aaPredicted RBP24.29■■□□□ 1.48
PMPCA-212ENST00000622209 NOD1Q9Y239 953 aa24.29■■□□□ 1.48
PMPCA-212ENST00000622209 MYH6P13533 1939 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 PDIA3P30101 505 aaKnown RBP24.28■■□□□ 1.48
PMPCA-212ENST00000622209 CDC27P30260 824 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 ARHGAP1Q07960 439 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 FUT2Q10981 343 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 RETREG2Q8NC44 543 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 SLC28A3Q9HAS3 691 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 PXMP2Q9NR77 195 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 VCANP13611 3396 aa24.28■■□□□ 1.48
PMPCA-212ENST00000622209 OPLAHO14841 1288 aa24.27■■□□□ 1.48
PMPCA-212ENST00000622209 EIF3JO75822 258 aaKnown RBP24.27■■□□□ 1.48
PMPCA-212ENST00000622209 NR3C2P08235 984 aa24.27■■□□□ 1.48
PMPCA-212ENST00000622209 MMP3P08254 477 aa24.27■■□□□ 1.48
PMPCA-212ENST00000622209 MYOGP15173 224 aa24.27■■□□□ 1.48
PMPCA-212ENST00000622209 ADD1P35611 737 aaKnown RBP24.27■■□□□ 1.48
PMPCA-212ENST00000622209 GHRHRQ02643 423 aa24.27■■□□□ 1.48
PMPCA-212ENST00000622209 PTPN11Q06124 597 aaPredicted RBP24.27■■□□□ 1.48
PMPCA-212ENST00000622209 ATP2A2P16615 1042 aaKnown RBP24.26■■□□□ 1.47
PMPCA-212ENST00000622209 ANKRD1Q15327 319 aa24.26■■□□□ 1.47
PMPCA-212ENST00000622209 DDX41Q9UJV9 622 aaKnown RBP24.26■■□□□ 1.47
PMPCA-212ENST00000622209 CNTNAP5Q8WYK1 1306 aa24.26■■□□□ 1.47
PMPCA-212ENST00000622209 BAZ2BQ9UIF8 2168 aaKnown RBP24.26■■□□□ 1.47
PMPCA-212ENST00000622209 PFKMP08237 780 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 IQCF3P0C7M6 154 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 MYCLP12524 364 aaPredicted RBP24.25■■□□□ 1.47
PMPCA-212ENST00000622209 IGFBP4P22692 258 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 HOXA13P31271 388 aaPredicted RBP24.25■■□□□ 1.47
PMPCA-212ENST00000622209 HSD17B4P51659 736 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 ADGRE1Q14246 886 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 PTGISQ16647 500 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 KAT2BQ92831 832 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 C22orf23Q9BZE7 217 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 FTOQ9C0B1 505 aaKnown RBP eCLIP24.25■■□□□ 1.47
PMPCA-212ENST00000622209 PRDM6Q9NQX0 595 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 MRVI1Q9Y6F6 885 aa24.25■■□□□ 1.47
PMPCA-212ENST00000622209 BFSP2Q13515 415 aa24.24■■□□□ 1.47
PMPCA-212ENST00000622209 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
PMPCA-212ENST00000622209 V9GY48 417 aaPredicted RBP24.24■■□□□ 1.47
PMPCA-212ENST00000622209 GCOM1H8Y6P7 765 aaPredicted RBP24.23■■□□□ 1.47
PMPCA-212ENST00000622209 PITPNM1O00562 1244 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 SORBS3O60504 671 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 POLR2MP0CAP2 368 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 RFC2P35250 354 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 RBM25P49756 843 aaKnown RBP24.23■■□□□ 1.47
PMPCA-212ENST00000622209 CCDC85BQ15834 202 aaPredicted RBP24.23■■□□□ 1.47
PMPCA-212ENST00000622209 DGKDQ16760 1214 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 GDF6Q6KF10 455 aaPredicted RBP24.23■■□□□ 1.47
PMPCA-212ENST00000622209 PCDHA11Q9Y5I1 949 aa24.23■■□□□ 1.47
PMPCA-212ENST00000622209 hCG_1642624A0A1W2PR95 340 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 ACTN1P12814 892 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 NEK4P51957 841 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 LAMC2Q13753 1193 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 PPP2R2DQ66LE6 453 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 DHX37Q8IY37 1157 aaKnown RBP24.22■■□□□ 1.47
PMPCA-212ENST00000622209 ZFP91Q96JP5 570 aaPredicted RBP24.22■■□□□ 1.47
PMPCA-212ENST00000622209 PDCD2LQ9BRP1 358 aa24.22■■□□□ 1.47
PMPCA-212ENST00000622209 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
PMPCA-212ENST00000622209 hCG_1984214I3L0E3 225 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 IFNAR1P17181 557 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 AK2P54819 239 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 CCT2P78371 535 aaKnown RBP24.21■■□□□ 1.47
PMPCA-212ENST00000622209 NTRK3Q16288 839 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 ZNF713Q8N859 430 aaPredicted RBP24.21■■□□□ 1.47
PMPCA-212ENST00000622209 CTAGE1Q96RT6 745 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 ALG1Q9BT22 464 aa24.21■■□□□ 1.47
PMPCA-212ENST00000622209 SPTBN5Q9NRC6 3674 aaKnown RBP24.2■■□□□ 1.46
PMPCA-212ENST00000622209 PRPF3O43395 683 aaKnown RBP24.2■■□□□ 1.46
PMPCA-212ENST00000622209 RGS20O76081 388 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 PSEN2P49810 448 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 HEATR3Q7Z4Q2 680 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 VSIG10LQ86VR7 867 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 FCHSD1Q86WN1 690 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 C7orf31Q8N865 590 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 IL31RAQ8NI17 732 aa24.2■■□□□ 1.46
PMPCA-212ENST00000622209 EMID1Q96A84 441 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms