RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 OCRLQ01968 901 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 TBC1D19Q8N5T2 526 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 MOCS3O95396 460 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 FLOT2Q14254 428 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 HIF1AQ16665 826 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 LRCH2Q5VUJ6 765 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 OR6B3Q8NGW1 331 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 CEP170P1Q96L14 293 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 KIF19Q2TAC6 998 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 NCOA5Q9HCD5 579 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 CENPKQ9BS16 269 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 TCF3P15923 654 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 SCARA5Q6ZMJ2 495 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 PCGF5Q86SE9 256 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-210ENST00000622186 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 TUBB2AQ13885 445 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 ARMC6Q6NXE6 501 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 TMTC1Q8IUR5 882 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 TUBB2BQ9BVA1 445 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 ANKRD36BQ8N2N9 1353 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 RAD51Q06609 339 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 SRRM1Q8IYB3 904 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 NLRP4Q96MN2 994 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 VEPH1Q14D04 833 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 BUB1O43683 1085 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 ARIH2O95376 493 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 KRT1P04264 644 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 PAMP19021 973 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 CUL1Q13616 776 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 DBNDD1Q9H9R9 158 aa13.12□□□□□ -0.31
SLC6A6-210ENST00000622186 MYO1FO00160 1098 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 DNAJC6O75061 913 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 TOM1L1O75674 476 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 GTF2H3Q13889 308 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 GJA10Q969M2 543 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 CALN1Q9BXU9 219 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 CD58P19256 250 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 OTUB1Q96FW1 271 aaPredicted RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 DACH2Q96NX9 599 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 GDF11O95390 407 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 C8orf58Q8NAV2 365 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 USP17L21D6R901 530 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 E5RI56 91 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 CPB1P15086 417 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 ART3Q13508 389 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 SUN2Q9UH99 717 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 TAC1P20366 129 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 EEF1DP29692 281 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms