RNA–Protein interactions for RNA: ENST00000622093.4

SLIT2-212, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 6,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-212ENST00000622093 MAGEA1P43355 309 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CCL15Q16663 113 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CPSF3Q9UKF6 684 aaKnown RBP12.61□□□□□ -0.39
SLIT2-212ENST00000622093 NEDD4P46934 1319 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 IFNB1P01574 187 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 PEX3P56589 373 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
SLIT2-212ENST00000622093 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 DPF3Q92784 378 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 GMNNO75496 209 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CTSHP09668 335 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 VPS37BQ9H9H4 285 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CBX8Q9HC52 389 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 CYP21A2P08686 494 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 USP28Q96RU2 1077 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 MYOZ2Q9NPC6 264 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
SLIT2-212ENST00000622093 RNF139Q8WU17 664 aa12.61□□□□□ -0.39
SLIT2-212ENST00000622093 PARK7Q99497 189 aaKnown RBP12.61□□□□□ -0.39
SLIT2-212ENST00000622093 A0A087WWV3 80 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 MFAP3P55082 362 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 ARHGAP4P98171 946 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
SLIT2-212ENST00000622093 SWSAP1Q6NVH7 229 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 LRRC4Q9HBW1 653 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 PPFIA1Q13136 1202 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 NR5A1Q13285 461 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 RPUSD2Q8IZ73 545 aaKnown RBP12.6□□□□□ -0.39
SLIT2-212ENST00000622093 SYCE1Q8N0S2 351 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 CACYBPQ9HB71 228 aaKnown RBP12.6□□□□□ -0.39
SLIT2-212ENST00000622093 UTYO14607 1347 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 RNF17Q9BXT8 1623 aaKnown RBP12.6□□□□□ -0.39
SLIT2-212ENST00000622093 OPA1O60313 960 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 LRRN2O75325 713 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 LMNB1P20700 586 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 TCP11Q8WWU5 503 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
SLIT2-212ENST00000622093 IGKV5-2P06315 115 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ALDH3A1P30838 453 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 STAT3P40763 770 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 VPS41P49754 854 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PRPSAP1Q14558 356 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PDZD4Q76G19 769 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 SMYD4Q8IYR2 804 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ACAD9Q9H845 621 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ITPK1Q13572 414 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 POLD4Q9HCU8 107 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ZNF70Q9UC06 446 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ANAPC4Q9UJX5 808 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 NSUN6Q8TEA1 469 aaKnown RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 ANAPC5Q9UJX4 755 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 NR2F2P24468 414 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 VAV2P52735 878 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 RCSD1Q6JBY9 416 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
SLIT2-212ENST00000622093 YAF2Q8IY57 180 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 SLC17A8Q8NDX2 589 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 H7C0C1 242 aa12.59□□□□□ -0.39
SLIT2-212ENST00000622093 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms