RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 GUCD1Q96NT3 240 aa29.01■■■□□ 2.23
VEGFA-229ENST00000621747 SEMA6BQ9H3T3 888 aa29.01■■■□□ 2.23
VEGFA-229ENST00000621747 BRPF3Q9ULD4 1205 aa29.01■■■□□ 2.23
VEGFA-229ENST00000621747 PITPNM1O00562 1244 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 F2P00734 622 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 PFKMP08237 780 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 HOXD8P13378 290 aaPredicted RBP29■■■□□ 2.23
VEGFA-229ENST00000621747 ICAM3P32942 547 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 PSEN2P49810 448 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 BFSP2Q13515 415 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 PTGISQ16647 500 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 HSDL1Q3SXM5 330 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 PCNX4Q63HM2 1172 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 HEATR3Q7Z4Q2 680 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 C7orf31Q8N865 590 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 RETREG2Q8NC44 543 aa29■■■□□ 2.23
VEGFA-229ENST00000621747 GPKOWQ92917 476 aaPredicted RBP eCLIP29■■■□□ 2.239e-7■□□□□ 11
VEGFA-229ENST00000621747 KLF18A0A0U1RQI7 1052 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 FIBPO43427 364 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 SORBS3O60504 671 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 ZNF286BP0CG31 522 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 HSPA4P34932 840 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 NEDD9Q14511 834 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 MFSD10Q14728 455 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 CCDC155Q8N6L0 562 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 RTEL1Q9NZ71 1219 aa28.99■■■□□ 2.23
VEGFA-229ENST00000621747 CNTNAP5Q8WYK1 1306 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 GOLGA8AA7E2F4 631 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 GOLGA8BA8MQT2 603 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 SPATA31C2B4DYI2 1134 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 DNAJB2P25686 324 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 RFC2P35250 354 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 RCAN1P53805 252 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 KIAA0753Q2KHM9 967 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 JAKMIP1Q96N16 626 aaKnown RBP28.98■■■□□ 2.23
VEGFA-229ENST00000621747 ALG1Q9BT22 464 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 GTF2IRD1Q9UHL9 959 aa28.98■■■□□ 2.23
VEGFA-229ENST00000621747 HAS3O00219 553 aa28.97■■■□□ 2.23
VEGFA-229ENST00000621747 GDF6Q6KF10 455 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-229ENST00000621747 OTOP2Q7RTS6 562 aa28.97■■■□□ 2.23
VEGFA-229ENST00000621747 NLRX1Q86UT6 975 aa28.97■■■□□ 2.23
VEGFA-229ENST00000621747 CAGE1Q8TC20 777 aa28.97■■■□□ 2.23
VEGFA-229ENST00000621747 NAP1L2Q9ULW6 460 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-229ENST00000621747 SNX14Q9Y5W7 946 aa28.97■■■□□ 2.23
VEGFA-229ENST00000621747 SPDYE3A6NKU9 549 aa28.96■■■□□ 2.23
VEGFA-229ENST00000621747 NOP56O00567 594 aaKnown RBP28.96■■■□□ 2.23
VEGFA-229ENST00000621747 BLOC1S2Q6QNY1 142 aa28.96■■■□□ 2.23
VEGFA-229ENST00000621747 TTYH1Q9H313 450 aaPredicted RBP28.96■■■□□ 2.23
VEGFA-229ENST00000621747 HDAC6Q9UBN7 1215 aa28.96■■■□□ 2.23
VEGFA-229ENST00000621747 IQCF3P0C7M6 154 aa28.95■■■□□ 2.22
VEGFA-229ENST00000621747 UBE2SQ16763 222 aa28.95■■■□□ 2.22
VEGFA-229ENST00000621747 METTL7BQ6UX53 244 aa28.95■■■□□ 2.22
VEGFA-229ENST00000621747 EHMT1Q9H9B1 1298 aa28.95■■■□□ 2.22
VEGFA-229ENST00000621747 CXXC1Q9P0U4 656 aaPredicted RBP28.95■■■□□ 2.22
VEGFA-229ENST00000621747 MYH7BA7E2Y1 1941 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 hCG_1984214I3L0E3 225 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 CPA1P15085 419 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 NAPAP54920 295 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 FUT2Q10981 343 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 SEMA3FQ13275 785 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 WWC2Q6AWC2 1192 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 PPP1R18Q6NYC8 613 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 Q6ZUG5 572 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 CYFIP1Q7L576 1253 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 DEFB128Q7Z7B8 93 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 TEX2Q8IWB9 1127 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 ZNF713Q8N859 430 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-229ENST00000621747 AFAP1L1Q8TED9 768 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 TIFAQ96CG3 184 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 CDHR1Q96JP9 859 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 CDX2Q99626 313 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-229ENST00000621747 SENP7Q9BQF6 1050 aa28.94■■■□□ 2.22
VEGFA-229ENST00000621747 CCDC196A0A1B0GTZ2 297 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 PSMA5P28066 241 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 METAP2P50579 478 aaKnown RBP eCLIP28.93■■■□□ 2.227e-12■□□□□ 8.9
VEGFA-229ENST00000621747 GIMAP8Q8ND71 665 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-229ENST00000621747 C16orf70Q9BSU1 422 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 PBX4Q9BYU1 374 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 PCDHA6Q9UN73 950 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 PCDHA8Q9Y5H6 950 aa28.93■■■□□ 2.22
VEGFA-229ENST00000621747 V9GY48 417 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-229ENST00000621747 ZBBXA8MT70 800 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 GRXCR1A8MXD5 290 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 EPB41L2O43491 1005 aaKnown RBP28.92■■■□□ 2.22
VEGFA-229ENST00000621747 ACTN1P12814 892 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 GPRASP2Q96D09 838 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 VWCEQ96DN2 955 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 CTAGE1Q96RT6 745 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 USP26Q9BXU7 913 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 BCAS3Q9H6U6 928 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 FAM217BQ9NTX9 383 aaPredicted RBP28.92■■■□□ 2.22
VEGFA-229ENST00000621747 MSRAQ9UJ68 235 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 SLC4A7Q9Y6M7 1214 aa28.92■■■□□ 2.22
VEGFA-229ENST00000621747 LGALS2P05162 132 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 RPS6KB1P23443 525 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 CDC27P30260 824 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 APOBRQ0VD83 1088 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 RAB30Q15771 203 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 FBXL16Q8N461 479 aa28.91■■■□□ 2.22
VEGFA-229ENST00000621747 SLC17A8Q8NDX2 589 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms