RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CRYGNQ8WXF5 182 aa21.17■□□□□ 0.98
CIRBP-245ENST00000621399 GPRASP2Q96D09 838 aa21.17■□□□□ 0.98
CIRBP-245ENST00000621399 CDHR1Q96JP9 859 aa21.17■□□□□ 0.98
CIRBP-245ENST00000621399 MXRA8Q9BRK3 442 aa21.17■□□□□ 0.98
CIRBP-245ENST00000621399 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
CIRBP-245ENST00000621399 JADE2Q9NQC1 790 aa21.17■□□□□ 0.98
CIRBP-245ENST00000621399 BTBD18B2RXH4 712 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 KBTBD13C9JR72 458 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 DNM1LO00429 736 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 GH1P01241 217 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 NR5A1Q13285 461 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 GNASQ5JWF2 1037 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 CYP2W1Q8TAV3 490 aa21.16■□□□□ 0.98
CIRBP-245ENST00000621399 PDE4DIPQ5VU43 2346 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 MYADML2A6NDP7 307 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 MAFGO15525 162 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 UBA1P22314 1058 aaKnown RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 MNX1P50219 401 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 USP11P51784 963 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 IRX5P78411 483 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 SP2Q02086 613 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 SEMA3FQ13275 785 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 PIK3AP1Q6ZUJ8 805 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 DHX37Q8IY37 1157 aaKnown RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 KLHDC9Q8NEP7 349 aa21.15■□□□□ 0.98
CIRBP-245ENST00000621399 DIS3LQ8TF46 1054 aaKnown RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 INTS4Q96HW7 963 aaKnown RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 PAWRQ96IZ0 340 aaKnown RBP21.15■□□□□ 0.98
CIRBP-245ENST00000621399 TNRC18O15417 2968 aaPredicted RBP21.14■□□□□ 0.97
CIRBP-245ENST00000621399 FAM86B1E9PN63 330 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 MEIS1O00470 390 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 SORBS3O60504 671 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 GGPS1O95749 300 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 FAM86B2P0C5J1 330 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 NKX3-2P78367 333 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 BEX3Q00994 111 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 LAMC2Q13753 1193 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 FSCN1Q16658 493 aaKnown RBP21.14■□□□□ 0.97
CIRBP-245ENST00000621399 INF2Q27J81 1249 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 NECAB2Q7Z6G3 386 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 TNFRSF25Q93038 417 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 MLXIPQ9HAP2 919 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 KCNH7Q9NS40 1196 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 FOXD4L1Q9NU39 408 aa21.14■□□□□ 0.97
CIRBP-245ENST00000621399 H3BQV1 296 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 CTAGE5O15320 804 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 ZEB2O60315 1214 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 CST5P28325 142 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 CIITAP33076 1130 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 CPT1AP50416 773 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 GNL2Q13823 731 aaKnown RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 NEDD9Q14511 834 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 KCNA10Q16322 511 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 BRDTQ58F21 947 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 CELF3Q5SZQ8 465 aaKnown RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 LARP1BQ659C4 914 aaKnown RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 NIPA1Q7RTP0 329 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 PLA2G4DQ86XP0 818 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 PCSK9Q8NBP7 692 aaKnown RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 TSEN34Q9BSV6 310 aaKnown RBP21.13■□□□□ 0.97
CIRBP-245ENST00000621399 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 PKD2L1Q9P0L9 805 aa21.13■□□□□ 0.97
CIRBP-245ENST00000621399 HSP90AA1P07900 732 aaKnown RBP21.12■□□□□ 0.97
CIRBP-245ENST00000621399 ARP10275 920 aa21.12■□□□□ 0.97
CIRBP-245ENST00000621399 PRR16Q569H4 304 aa21.12■□□□□ 0.97
CIRBP-245ENST00000621399 EARS2Q5JPH6 523 aaKnown RBP21.12■□□□□ 0.97
CIRBP-245ENST00000621399 MYSM1Q5VVJ2 828 aa21.12■□□□□ 0.97
CIRBP-245ENST00000621399 CCSAPQ6IQ19 270 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-245ENST00000621399 GIMAP8Q8ND71 665 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-245ENST00000621399 AFG1LQ8WV93 481 aa21.12■□□□□ 0.97
CIRBP-245ENST00000621399 SENP7Q9BQF6 1050 aa21.12■□□□□ 0.97
CIRBP-245ENST00000621399 FOXP1Q9H334 677 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-245ENST00000621399 IGLV3-22A0A075B6J6 115 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 FAM205CA6NFA0 338 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 EDIL3O43854 480 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 ATP9AO75110 1047 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 ACLYP53396 1101 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 SETQ01105 290 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-245ENST00000621399 LETM2Q2VYF4 491 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 CYFIP1Q7L576 1253 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 UBE2Q1Q7Z7E8 422 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 NEK8Q86SG6 692 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 EMID1Q96A84 441 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-245ENST00000621399 FERMT2Q96AC1 680 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 SPATA33Q96N06 139 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 SENP6Q9GZR1 1112 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-245ENST00000621399 BCAS3Q9H6U6 928 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 AGO4Q9HCK5 861 aaKnown RBP21.11■□□□□ 0.97
CIRBP-245ENST00000621399 PHF24Q9UPV7 400 aa21.11■□□□□ 0.97
CIRBP-245ENST00000621399 MOXD2PA6NHM9 499 aa21.1■□□□□ 0.97
CIRBP-245ENST00000621399 A6NJR5 290 aa21.1■□□□□ 0.97
CIRBP-245ENST00000621399 ASGR1P07306 291 aa21.1■□□□□ 0.97
CIRBP-245ENST00000621399 KCNA2P16389 499 aa21.1■□□□□ 0.97
CIRBP-245ENST00000621399 METTL7BQ6UX53 244 aa21.1■□□□□ 0.97
CIRBP-245ENST00000621399 CYP3A7-CYP3A51PA0A087WV96 503 aa21.09■□□□□ 0.97
CIRBP-245ENST00000621399 TDP2O95551 362 aa21.09■□□□□ 0.97
CIRBP-245ENST00000621399 MYL3P08590 195 aa21.09■□□□□ 0.97
CIRBP-245ENST00000621399 COL6A1P12109 1028 aa21.09■□□□□ 0.97
CIRBP-245ENST00000621399 PDCP20941 246 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms