RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ABHD10Q9NUJ1 306 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 WDR37Q9Y2I8 494 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 TMEM221A6NGB7 291 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 GPAA1O43292 621 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 CIAO1O76071 339 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 NQO1P15559 274 aaKnown RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 TUBP50607 506 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 VAV2P52735 878 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 ITIH4Q14624 930 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 TBC1D1Q86TI0 1168 aaPredicted RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 CTAGE1Q96RT6 745 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 STK32BQ9NY57 414 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 MAPK8IP1Q9UQF2 711 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 ITGB4P16144 1822 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 E2F6O75461 281 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CSF1RP07333 972 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 DRD4P21917 467 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 GRIN1Q05586 938 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 MORC3Q14149 939 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 FAM182BQ5T319 152 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CACNA2D4Q7Z3S7 1137 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CCDC197Q8NCU1 140 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SLC35B4Q969S0 331 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 PREBQ9HCU5 417 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 ZBTB43O43298 467 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 ORC4O43929 436 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 UPP2O95045 317 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 NDUFA10O95299 355 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 ITGA6P23229 1130 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 ERCC5P28715 1186 aaPredicted RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 AKNAD1Q5T1N1 836 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SLC9C2Q5TAH2 1124 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 MFSD4BQ5TF39 518 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.37□□□□□ -0.59
VPS11-207ENST00000620429 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 MED15Q96RN5 788 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 TRIM10Q9UDY6 481 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 WFS1O76024 890 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 BAG3O95817 575 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 MYBL1P10243 752 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SP100P23497 879 aaPredicted RBP11.37□□□□□ -0.59
VPS11-207ENST00000620429 ZAP70P43403 619 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 POLE2P56282 527 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 KLHL10Q6JEL2 608 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 LRIG3Q6UXM1 1119 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CREG2Q8IUH2 290 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 ANKS4BQ8N8V4 417 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 NDNQ99608 321 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SLC26A6Q9BXS9 759 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SPATA7Q9P0W8 599 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
VPS11-207ENST00000620429 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 B4E1Z4 1266 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 E7ENQ6 273 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
VPS11-207ENST00000620429 SEMA3EO15041 775 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 ZNF185O15231 689 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 RANBP6O60518 1105 aaKnown RBP11.36□□□□□ -0.59
VPS11-207ENST00000620429 FLOT1O75955 427 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 ATP6V1C1P21283 382 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 STAT6P42226 847 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 SARSP49591 514 aaKnown RBP11.36□□□□□ -0.59
VPS11-207ENST00000620429 PLCD1P51178 756 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 LMNB2Q03252 620 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 TRIM14Q14142 442 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 HAUS3Q68CZ6 603 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 CPLX4Q7Z7G2 160 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 TBC1D10CQ8IV04 446 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 SPATA4Q8NEY3 305 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 BTAF1O14981 1849 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 ZNF189O75820 626 aaPredicted RBP11.36□□□□□ -0.59
VPS11-207ENST00000620429 PRLRP16471 622 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
VPS11-207ENST00000620429 STX17P56962 302 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms