RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CATSPER3Q86XQ3 398 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 TC2NQ8N9U0 490 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 C16orf45Q96MC5 204 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-206ENST00000619300 TANGO6Q9C0B7 1094 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 VPS16Q9H269 839 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 TAB2Q9NYJ8 693 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 VAV3Q9UKW4 847 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 ATAD5Q96QE3 1844 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 SSBP05455 408 aaKnown RBP eCLIP21.25■□□□□ 0.99
PSPC1-206ENST00000619300 VCAM1P19320 739 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 HSD17B4P51659 736 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 SPP2Q13103 211 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 DGKZQ13574 1117 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 E4F1Q66K89 784 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-206ENST00000619300 CSGALNACT2Q8N6G5 542 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 SLC38A10Q9HBR0 1119 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 SPON1Q9HCB6 807 aa21.25■□□□□ 0.99
PSPC1-206ENST00000619300 ADKP55263 362 aaKnown RBP21.24■□□□□ 0.99
PSPC1-206ENST00000619300 CENPPQ6IPU0 288 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 ZKSCAN4Q969J2 545 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-206ENST00000619300 WRNIP1Q96S55 665 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 PICK1Q9NRD5 415 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 TRMT1Q9NXH9 659 aaKnown RBP21.24■□□□□ 0.99
PSPC1-206ENST00000619300 MAGEC2Q9UBF1 373 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-206ENST00000619300 FLOT1O75955 427 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 SPATA31C1P0DKV0 1188 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 BACE1P56817 501 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 CEP55Q53EZ4 464 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 PPFIBP1Q86W92 1011 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 GUF1Q8N442 669 aaKnown RBP21.24■□□□□ 0.99
PSPC1-206ENST00000619300 CLEC4DQ8WXI8 215 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 PRIMPOLQ96LW4 560 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 AS3MTQ9HBK9 375 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 PPP1R9AQ9ULJ8 1098 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 ITIH6Q6UXX5 1313 aa21.24■□□□□ 0.99
PSPC1-206ENST00000619300 POTEFA5A3E0 1075 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 AKR1B15C9JRZ8 316 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-206ENST00000619300 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 TNNT1P13805 278 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 PTPRAP18433 802 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 EPS15P42566 896 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 HIRAP54198 1017 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-206ENST00000619300 UBXN2AP68543 259 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 POTEGQ6S5H5 508 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 POTEEQ6S8J3 1075 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 MCF2L2Q86YR7 1114 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 TMEM139Q8IV31 216 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 SEMA6BQ9H3T3 888 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 RPAP3Q9H6T3 665 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-206ENST00000619300 PANK4Q9NVE7 773 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 GGA3Q9NZ52 723 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 PPP2R3BQ9Y5P8 575 aa21.23■□□□□ 0.99
PSPC1-206ENST00000619300 GPBP1Q86WP2 473 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 CPXCR1Q8N123 301 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 ZNF280CQ8ND82 737 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 BAG1Q99933 345 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-206ENST00000619300 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-206ENST00000619300 DNM3Q9UQ16 869 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 RABGAP1Q9Y3P9 1069 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 MEIS1O00470 390 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 STX10O60499 249 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 CYP11B2P19099 503 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 SLC12A3P55017 1021 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 RBL2Q08999 1139 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 COASYQ13057 564 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 OTOP1Q7RTM1 612 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 SLC5A5Q92911 643 aa21.22■□□□□ 0.99
PSPC1-206ENST00000619300 RAVER2Q9HCJ3 691 aaKnown RBP21.22■□□□□ 0.99
PSPC1-206ENST00000619300 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-206ENST00000619300 NFIBO00712 420 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 PSMD10O75832 226 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 GHRHRQ02643 423 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 NYAP1Q6ZVC0 841 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 FAM114A1Q8IWE2 563 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 CCDC65Q8IXS2 484 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 EIF2AK1Q9BQI3 630 aaKnown RBP21.21■□□□□ 0.99
PSPC1-206ENST00000619300 PNMA2Q9UL42 364 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.21■□□□□ 0.994e-8■■■□□ 19.1
PSPC1-206ENST00000619300 EML1O00423 815 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 ARHGAP6O43182 974 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 ZBED4O75132 1171 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 FDX1P10109 184 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 ALAS1P13196 640 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 PSMC6P62333 389 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 UBXN1Q04323 297 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 PTPN14Q15678 1187 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 LRCH2Q5VUJ6 765 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 KCTD17Q8N5Z5 321 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 KLRG1Q96E93 195 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 PANX2Q96RD6 677 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
PSPC1-206ENST00000619300 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
PSPC1-206ENST00000619300 LGALS16A8MUM7 142 aa21.2■□□□□ 0.98
PSPC1-206ENST00000619300 TPM2P07951 284 aa21.2■□□□□ 0.98
PSPC1-206ENST00000619300 PPP2R5CQ13362 524 aa21.2■□□□□ 0.98
PSPC1-206ENST00000619300 ARSHQ5FYA8 562 aa21.2■□□□□ 0.98
PSPC1-206ENST00000619300 SAMD3Q8N6K7 520 aa21.2■□□□□ 0.98
PSPC1-206ENST00000619300 SYT2Q8N9I0 419 aaPredicted RBP21.2■□□□□ 0.98
PSPC1-206ENST00000619300 MAP3K20Q9NYL2 800 aaKnown RBP21.2■□□□□ 0.98
PSPC1-206ENST00000619300 FZD1Q9UP38 647 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms