RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 TAP1Q03518 808 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 SCRN1Q12765 414 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 TROAPQ12815 778 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 STK3Q13188 491 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 RTN1Q16799 776 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 CCDC83Q8IWF9 413 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 NECAB1Q8N987 351 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 FAM133AQ8N9E0 248 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
SYN3-213ENST00000619146 GDPD5Q8WTR4 605 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 UIMC1Q96RL1 719 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 LZTS2Q9BRK4 669 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
SYN3-213ENST00000619146 ACAD9Q9H845 621 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 KIF3AQ9Y496 699 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 ZNF318Q5VUA4 2279 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 LARGE1O95461 756 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
SYN3-213ENST00000619146 CCT2P78371 535 aaKnown RBP10.64□□□□□ -0.71
SYN3-213ENST00000619146 HMGN5P82970 282 aaKnown RBP10.64□□□□□ -0.71
SYN3-213ENST00000619146 GRB10Q13322 594 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 TAPT1Q6NXT6 567 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 NSMFQ6X4W1 530 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 GMCL1P1Q8NEA9 526 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 HLA-CQ95604 372 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 FBXO40Q9UH90 709 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 SMC3Q9UQE7 1217 aa10.64□□□□□ -0.71
SYN3-213ENST00000619146 ZNF536O15090 1300 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 ZEB2O60315 1214 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 CABYRO75952 493 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
SYN3-213ENST00000619146 BMP3P12645 472 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 GRM4Q14833 912 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 MYL10Q9BUA6 226 aa10.63□□□□□ -0.71
SYN3-213ENST00000619146 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
SYN3-213ENST00000619146 RALGAPA2Q2PPJ7 1873 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 ASB14A6NK59 587 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 PDHBP11177 359 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 IFNAR1P17181 557 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 RXRAP19793 462 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 PDCP20941 246 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 SMARCA1P28370 1054 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 ST3GAL1Q11201 340 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
SYN3-213ENST00000619146 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 DCAF4Q8WV16 495 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 COPS5Q92905 334 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 GMCL1Q96IK5 515 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
SYN3-213ENST00000619146 KIAA1671Q9BY89 1806 aa10.62□□□□□ -0.71
SYN3-213ENST00000619146 BAZ2BQ9UIF8 2168 aaKnown RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 PALM3A6NDB9 673 aaPredicted RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 LPXNO60711 386 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 ACTN1P12814 892 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 ADD1P35611 737 aaKnown RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 SLC1A4P43007 532 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 STAT2P52630 851 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 NKX3-2P78367 333 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 TMTC3Q6ZXV5 915 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 HERC6Q8IVU3 1022 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 SMARCC2Q8TAQ2 1214 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 WASF1Q92558 559 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 SLC9A7Q96T83 725 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
SYN3-213ENST00000619146 COG5Q9UP83 839 aa10.61□□□□□ -0.71
SYN3-213ENST00000619146 STK36Q9NRP7 1315 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 GPR37L1O60883 481 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 CTDNEP1O95476 244 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 IQCF3P0C7M6 154 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 IL9P15248 144 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 CDC27P30260 824 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
SYN3-213ENST00000619146 SLC16A2P36021 539 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 OAZ1P54368 228 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 DEFB103AP81534 67 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
SYN3-213ENST00000619146 SSRP1Q08945 709 aaKnown RBP10.6□□□□□ -0.71
SYN3-213ENST00000619146 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 NTRK3Q16288 839 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 CCDC96Q2M329 555 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms