RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 GJC1P36383 396 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 SPC25Q9HBM1 224 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 SECISBP2LQ93073 1101 aaKnown RBP15.27■□□□□ 0.04
CIITA-213ENST00000618327 EMILIN3Q9NT22 766 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 FBXO40Q9UH90 709 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.04
CIITA-213ENST00000618327 CASP1P29466 404 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 USP11P51784 963 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 TUBB4BP68371 445 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
CIITA-213ENST00000618327 MYZAPP0CAP1 466 aa15.27■□□□□ 0.03
CIITA-213ENST00000618327 ANGEL2Q5VTE6 544 aaKnown RBP15.27■□□□□ 0.03
CIITA-213ENST00000618327 PARVGQ9HBI0 331 aa15.27■□□□□ 0.03
CIITA-213ENST00000618327 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.03
CIITA-213ENST00000618327 MTMR1Q13613 665 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 NOX5Q96PH1 765 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 TM4SF1P30408 202 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
CIITA-213ENST00000618327 HMGCS2P54868 508 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 SAMD7Q7Z3H4 446 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 PHLPP1O60346 1717 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 SMARCA1P28370 1054 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 STAT1P42224 750 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 AGXT2Q9BYV1 514 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 RPAP3Q9H6T3 665 aaPredicted RBP15.26■□□□□ 0.03
CIITA-213ENST00000618327 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
CIITA-213ENST00000618327 MTMR2Q13614 643 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 PPP2R5AQ15172 486 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 LPAR1Q92633 364 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 DDX12PQ92771 950 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
CIITA-213ENST00000618327 IFIH1Q9BYX4 1025 aaKnown RBP15.26■□□□□ 0.03
CIITA-213ENST00000618327 STXBP3O00186 592 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 HNRNPDLO14979 420 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 PSAPP07602 524 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 IVLP07476 585 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 ATP1A3P13637 1013 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 CASP14P31944 242 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 ACTN2P35609 894 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 GTF2A1P52655 376 aaPredicted RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 PPP2R3AQ06190 1150 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 SEC23AQ15436 765 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 POMGNT1Q8WZA1 660 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 DESI2Q9BSY9 194 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 GGA3Q9NZ52 723 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 KRT19P08727 400 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 TMOD1P28289 359 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 IGBP1P78318 339 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 UNC13DQ70J99 1090 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 M0QZ92 97 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 WDR46O15213 610 aaKnown RBP15.25■□□□□ 0.03
CIITA-213ENST00000618327 C2orf69Q8N8R5 385 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 PIGOQ8TEQ8 1089 aa15.25■□□□□ 0.03
CIITA-213ENST00000618327 PRELPP51888 382 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 MAN2A1Q16706 1144 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 HOOK3Q86VS8 718 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 EXOC3L4Q17RC7 722 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 THAP9Q9H5L6 903 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 SETD1AO15047 1707 aaKnown RBP15.24■□□□□ 0.03
CIITA-213ENST00000618327 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 DLATP10515 647 aaKnown RBP15.24■□□□□ 0.03
CIITA-213ENST00000618327 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 PDXDC2PQ6P474 469 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 CCDC50Q8IVM0 306 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 RAD54LQ92698 747 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 ACCSQ96QU6 501 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
CIITA-213ENST00000618327 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 RSPH14Q9UHP6 348 aa15.24■□□□□ 0.03
CIITA-213ENST00000618327 KIF4AO95239 1232 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
CIITA-213ENST00000618327 KIF22Q14807 665 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 STXBP2Q15833 593 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 MAATS1Q7Z4T9 603 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 POTECB2RU33 542 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 E9PMD0 336 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 CLIC2O15247 247 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 SPOPO43791 374 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 JAK3P52333 1124 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 LRRC63Q05C16 580 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms