RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 MMEP08473 750 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 MCM2P49736 904 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 VPS37AQ8NEZ2 397 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SRRT-216ENST00000618262 RMDN2Q96LZ7 410 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 UBAP1Q9NZ09 502 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 AFG3L2Q9Y4W6 797 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 BOLA2-SMG1P6H3BVE0 249 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 PECAM1P16284 738 aaPredicted RBP13.44□□□□□ -0.26
SRRT-216ENST00000618262 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
SRRT-216ENST00000618262 NTRK3Q16288 839 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 PAGR1Q9BTK6 254 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 VCPKMTQ9H867 229 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
SRRT-216ENST00000618262 AOC2O75106 756 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
SRRT-216ENST00000618262 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 ANKRD13BQ86YJ7 626 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
SRRT-216ENST00000618262 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
SRRT-216ENST00000618262 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
SRRT-216ENST00000618262 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
SRRT-216ENST00000618262 C3orf20Q8ND61 904 aa13.43□□□□□ -0.26
SRRT-216ENST00000618262 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
SRRT-216ENST00000618262 NAA30Q147X3 362 aaPredicted RBP13.43□□□□□ -0.26
SRRT-216ENST00000618262 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
SRRT-216ENST00000618262 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
SRRT-216ENST00000618262 R3HDMLQ9H3Y0 253 aa13.43□□□□□ -0.26
SRRT-216ENST00000618262 A1CFQ9NQ94 594 aaKnown RBP13.43□□□□□ -0.26
SRRT-216ENST00000618262 TRIM64CA6NLI5 447 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 H3BQV1 296 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 SYT1P21579 422 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 KIF5BP33176 963 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 USP4Q13107 963 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 GRM4Q14833 912 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 JADE2Q9NQC1 790 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
SRRT-216ENST00000618262 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
SRRT-216ENST00000618262 DDAH1O94760 285 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 FBXO38Q6PIJ6 1188 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 MYOCDQ8IZQ8 938 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
SRRT-216ENST00000618262 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 MTRQ99707 1265 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
SRRT-216ENST00000618262 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
SRRT-216ENST00000618262 STAT2P52630 851 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 CUL4AQ13619 759 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 LRSAM1Q6UWE0 723 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 CLEC17AQ6ZS10 378 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 SRRTQ9BXP5 876 aaKnown RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 PHACTR1Q9C0D0 580 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 IGSF5Q9NSI5 407 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 POLR3GO15318 223 aaPredicted RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 EVCP57679 992 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 CCL15Q16663 113 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 SPATA21Q7Z572 469 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 PDILTQ8N807 584 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 BHMTQ93088 406 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 CCDC194A0A1B0GVG4 234 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 ACTN2P35609 894 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 PARP9Q8IXQ6 854 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 KIAA1524Q8TCG1 905 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 ALDH8A1Q9H2A2 487 aaPredicted RBP13.41□□□□□ -0.26
SRRT-216ENST00000618262 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
SRRT-216ENST00000618262 PLIN4Q96Q06 1357 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 TMEM88BA6NKF7 163 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 NR5A1Q13285 461 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
SRRT-216ENST00000618262 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 CALM1P0DP23 149 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 CALM2P0DP24 149 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 CALM3P0DP25 149 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms