RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
SBDS-205ENST00000617799 CDHR1Q96JP9 859 aa19.56■□□□□ 0.72
SBDS-205ENST00000617799 C11orf49Q9H6J7 331 aa19.56■□□□□ 0.72
SBDS-205ENST00000617799 DDX41Q9UJV9 622 aaKnown RBP19.56■□□□□ 0.72
SBDS-205ENST00000617799 MMP1P03956 469 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 TGFB3P10600 412 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 ITGB5P18084 799 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 CPT1AP50416 773 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
SBDS-205ENST00000617799 NONOQ15233 471 aaKnown RBP eCLIP19.55■□□□□ 0.72
SBDS-205ENST00000617799 NPY5RQ15761 445 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 BRDTQ58F21 947 aaPredicted RBP19.55■□□□□ 0.72
SBDS-205ENST00000617799 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
SBDS-205ENST00000617799 PCSK9Q8NBP7 692 aaKnown RBP19.55■□□□□ 0.72
SBDS-205ENST00000617799 OXER1Q8TDS5 423 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 GPRASP2Q96D09 838 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 PKD2L1Q9P0L9 805 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 UBIAD1Q9Y5Z9 338 aa19.55■□□□□ 0.72
SBDS-205ENST00000617799 SPATA31C2B4DYI2 1134 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 ZEB2O60315 1214 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 GGPS1O95749 300 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 UBA1P22314 1058 aaKnown RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 CST5P28325 142 aaPredicted RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 GJB2P29033 226 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 MNX1P50219 401 aaPredicted RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 GNL2Q13823 731 aaKnown RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 KCNA10Q16322 511 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 DIS3L2Q8IYB7 885 aaKnown RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 TBCKQ8TEA7 893 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 FERMT2Q96AC1 680 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 MXRA8Q9BRK3 442 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 SENP6Q9GZR1 1112 aaPredicted RBP19.54■□□□□ 0.72
SBDS-205ENST00000617799 MLXIPQ9HAP2 919 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 JADE2Q9NQC1 790 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 MYH7BA7E2Y1 1941 aa19.54■□□□□ 0.72
SBDS-205ENST00000617799 M0R2N6 131 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 ICAM3P32942 547 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 ACLYP53396 1101 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 ARHGAP1Q07960 439 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 LAMC2Q13753 1193 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 PIK3AP1Q6ZUJ8 805 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 KLHDC9Q8NEP7 349 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 AFG1LQ8WV93 481 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 VTI1AQ96AJ9 217 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 TSEN34Q9BSV6 310 aaKnown RBP19.53■□□□□ 0.72
SBDS-205ENST00000617799 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
SBDS-205ENST00000617799 MOXD2PA6NHM9 499 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 ASGR1P07306 291 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 MYL3P08590 195 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 CYP3A4P08684 503 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 NR5A1Q13285 461 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 NEDD9Q14511 834 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 INF2Q27J81 1249 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 CELF3Q5SZQ8 465 aaKnown RBP19.52■□□□□ 0.72
SBDS-205ENST00000617799 UBE2Q1Q7Z7E8 422 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 GIMAP8Q8ND71 665 aaPredicted RBP19.52■□□□□ 0.72
SBDS-205ENST00000617799 CYP2W1Q8TAV3 490 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 TSHZ2Q9NRE2 1034 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 KCNH7Q9NS40 1196 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 BRCA2P51587 3418 aa19.52■□□□□ 0.72
SBDS-205ENST00000617799 A0A1W2PQ45 241 aaPredicted RBP19.51■□□□□ 0.71
SBDS-205ENST00000617799 A0A1W2PQY0 241 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 BTBD18B2RXH4 712 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 FAM86B1E9PN63 330 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 H3BQV1 296 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 NOP56O00567 594 aaKnown RBP19.51■□□□□ 0.71
SBDS-205ENST00000617799 CTAGE5O15320 804 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 FAM86B2P0C5J1 330 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 USP11P51784 963 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 SP2Q02086 613 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 SP4Q02446 784 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 PRR16Q569H4 304 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 FBXO18Q8NFZ0 1043 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 CRYGNQ8WXF5 182 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 GLT1D1Q96MS3 346 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 SPATA33Q96N06 139 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 HTATIP2Q9BUP3 242 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 POLR3EQ9NVU0 708 aa19.51■□□□□ 0.71
SBDS-205ENST00000617799 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
SBDS-205ENST00000617799 MAFGO15525 162 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 ARP10275 920 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 COL6A1P12109 1028 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 ATN1P54259 1190 aaPredicted RBP19.5■□□□□ 0.71
SBDS-205ENST00000617799 NKX3-2P78367 333 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 SETQ01105 290 aaPredicted RBP19.5■□□□□ 0.71
SBDS-205ENST00000617799 MLLT1Q03111 559 aaPredicted RBP19.5■□□□□ 0.71
SBDS-205ENST00000617799 LETM2Q2VYF4 491 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 MYSM1Q5VVJ2 828 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 CXCL17Q6UXB2 119 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 CYFIP1Q7L576 1253 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 EMID1Q96A84 441 aaPredicted RBP19.5■□□□□ 0.71
SBDS-205ENST00000617799 SDF4Q9BRK5 362 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 STARD7Q9NQZ5 370 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
SBDS-205ENST00000617799 A6NJR5 290 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms