RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 KCNG1Q9UIX4 513 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 K7ERI5 159 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 GRIN3BO60391 1043 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 HSF2BPO75031 334 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 TFDP1Q14186 410 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SCARA5Q6ZMJ2 495 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF365Q70YC5 407 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 CATSPER4Q7RTX7 472 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PEX26Q7Z412 305 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 RSPH3Q86UC2 560 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 CARD6Q9BX69 1037 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 MTFR1LQ9H019 292 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 P4HA1P13674 534 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PIK3CAP42336 1068 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PPP2R5AQ15172 486 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEDQ86YR6 584 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PARVGQ9HBI0 331 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ASIC3Q9UHC3 531 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF609O15014 1411 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SRGNP10124 158 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 GSDMAQ96QA5 445 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 RIOK1Q9BRS2 568 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 SERPINA10Q9UK55 444 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ARHGAP6O43182 974 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PPP6R2O75170 966 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 CELF2O95319 508 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 PSAPP07602 524 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 CYP2B6P20813 491 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 VAV2P52735 878 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 EVCP57679 992 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 TNNC1P63316 161 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 DAAM2Q86T65 1068 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 AK8Q96MA6 479 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
SMARCA1-205ENST00000617310 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 BAATQ14032 418 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 ALX1Q15699 326 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 SWSAP1Q6NVH7 229 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 FEM1BQ9UK73 627 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 RPAP1Q9BWH6 1393 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 GOLGA6L7A0A1B0GV03 622 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 CXCL9Q07325 125 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF394Q53GI3 561 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 NAA35Q5VZE5 725 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 RSRC2Q7L4I2 434 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 FMNL3Q8IVF7 1028 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 LRFN2Q9ULH4 789 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 BAZ2BQ9UIF8 2168 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 LAD1O00515 517 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 SRPRBQ9Y5M8 271 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 PXDNQ92626 1479 aa11.11□□□□□ -0.63
SMARCA1-205ENST00000617310 GOLGA8SH3BPF8 625 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 IPO5O00410 1097 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 FCER1AP12319 257 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 GRM4Q14833 912 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 PNPLA7Q6ZV29 1317 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 GOLGA5Q8TBA6 731 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 P2RX5Q93086 422 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 CCDC77Q9BR77 488 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 ACAD9Q9H845 621 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 H0YCG3 227 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 SELENOSQ9BQE4 189 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 METTL14Q9HCE5 456 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 hCG_1984214I3L0E3 225 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms