RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 LARP4BQ92615 738 aaKnown RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 CLMNQ96JQ2 1002 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 SYNRGQ9UMZ2 1314 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 GOLGA6L6A8MZA4 724 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 WDR46O15213 610 aaKnown RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 SORBS3O60504 671 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 VGLL4Q14135 290 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 PDIA5Q14554 519 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 ZNF658Q5TYW1 1059 aaPredicted RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 KRT26Q7Z3Y9 468 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 FAM160B2Q86V87 743 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 CATSPER3Q86XQ3 398 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 LRRC8AQ8IWT6 810 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 DDX12PQ92771 950 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 ZHX3Q9H4I2 956 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 CTDP1Q9Y5B0 961 aaPredicted RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 ICAM1P05362 532 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 PIGOQ8TEQ8 1089 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 CLEC4DQ8WXI8 215 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 DCPSQ96C86 337 aaKnown RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 TAAR1Q96RJ0 339 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 SH2D3AQ9BRG2 576 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 FGFBP2Q9BYJ0 223 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 WDR11Q9BZH6 1224 aa8.73□□□□□ -1.01
NEK3-207ENST00000617054 MRPL11Q9Y3B7 192 aaKnown RBP8.73□□□□□ -1.01
NEK3-207ENST00000617054 IGLV3-22A0A075B6J6 115 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 VWA5AO00534 786 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 ZNF18P17022 549 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 CYP3A7P24462 503 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 MMP14P50281 582 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SPIRE1Q08AE8 756 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEK3-207ENST00000617054 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 CTTNQ14247 550 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 ARMCX5Q6P1M9 558 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SULF1Q8IWU6 871 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 CPLX3Q8WVH0 158 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 RAD54LQ92698 747 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 RAB34Q9BZG1 259 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 GLT8D2Q9H1C3 349 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 VPS16Q9H269 839 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 ADARB2Q9NS39 739 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 ZNF112Q9UJU3 913 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 PPP1R9AQ9ULJ8 1098 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 MYCLP12524 364 aaPredicted RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 GCFC2P16383 781 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 RPS6P62753 249 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 TREML2Q5T2D2 321 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SPATA1Q5VX52 437 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 KIAA0895Q8NCT3 520 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 LPAR1Q92633 364 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 SFI1A8K8P3 1242 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 PES1O00541 588 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 FOSP01100 380 aaPredicted RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 ERCC5P28715 1186 aaPredicted RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 ADKP55263 362 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 PAK1Q13153 545 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 NOLC1Q14978 699 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEK3-207ENST00000617054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 R3HDMLQ9H3Y0 253 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 EXOC1Q9NV70 894 aa8.72□□□□□ -1.01
NEK3-207ENST00000617054 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
NEK3-207ENST00000617054 USP27XA6NNY8 438 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 SPATA31C1P0DKV0 1188 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 ITGB5P18084 799 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 Q4G0T1 1027 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 DNTTIP2Q5QJE6 756 aaKnown RBP8.71□□□□□ -1.01
NEK3-207ENST00000617054 CEP135Q66GS9 1140 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 SNRNP48Q6IEG0 339 aaKnown RBP8.71□□□□□ -1.01
NEK3-207ENST00000617054 TPH2Q8IWU9 490 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 ADSSL1Q8N142 457 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.71□□□□□ -1.01
NEK3-207ENST00000617054 OTUD5Q96G74 571 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.01
NEK3-207ENST00000617054 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.01
NEK3-207ENST00000617054 SRRTQ9BXP5 876 aaKnown RBP8.71□□□□□ -1.01
NEK3-207ENST00000617054 ZNF408Q9H9D4 720 aa8.71□□□□□ -1.01
NEK3-207ENST00000617054 IRF6O14896 467 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 RHOBTB3O94955 611 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 SKILP12757 684 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 TMEM132BQ14DG7 1078 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 SUPT20HL1Q3ZLR7 823 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 CEP55Q53EZ4 464 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 ANKRD40Q6AI12 368 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 KIAA1524Q8TCG1 905 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 C7orf25Q9BPX7 421 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 TAB2Q9NYJ8 693 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms