RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZNF713Q8N859 430 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 GFPT2O94808 682 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 EIF2AK2P19525 551 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 RASA1P20936 1047 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CCZ1BP86790 482 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CCZ1P86791 482 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CDC42EP5Q6NZY7 148 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 EEPD1Q7L9B9 569 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 SMAP1Q8IYB5 467 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 PANX2Q96RD6 677 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 POLLQ9UGP5 575 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 ACTN4O43707 911 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 AFPP02771 609 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 BCRP11274 1271 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CCNE1P24864 410 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 TRPC3Q13507 836 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 IFT20Q8IY31 132 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 TRIM58Q8NG06 486 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 PDE11AQ9HCR9 933 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 EVX2Q03828 476 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GFPT1Q06210 699 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 QRICH1Q2TAL8 776 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 SLC51AQ86UW1 340 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 HOOK3Q86VS8 718 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 PLCD4Q9BRC7 762 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GCNT4Q9P109 453 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA6L7A0A1B0GV03 622 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA6BA6NDN3 693 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 NDUFA10O95299 355 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TOB1P50616 345 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 SLC7A5Q01650 507 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TUBB2AQ13885 445 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 MAN2A1Q16706 1144 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 MCF2L2Q86YR7 1114 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 DYDC2Q96IM9 177 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TUBB2BQ9BVA1 445 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 AZI2Q9H6S1 392 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 HYOU1Q9Y4L1 999 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 XRN1Q8IZH2 1706 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 LIG4P49917 911 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 FBXO38Q6PIJ6 1188 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 BHMT2Q9H2M3 363 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 DPH5Q9H2P9 285 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 KCNK9Q9NPC2 374 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 AGTPBP1Q9UPW5 1226 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TMEM179Q6ZVK1 233 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 OTUD6AQ7L8S5 288 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 SFR1Q86XK3 245 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 UBL4BQ8N7F7 174 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 KRT12Q99456 494 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 NDST4Q9H3R1 872 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 HDAC6Q9UBN7 1215 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA6CA6NDK9 693 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA6DP0CG33 693 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TNFAIP1Q13829 316 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 LLGL1Q15334 1064 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 PPM1KQ8N3J5 372 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TTLL6Q8N841 843 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 TMEM60Q9H2L4 133 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 MLXIPQ9HAP2 919 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA6AQ9NYA3 693 aa9.8□□□□□ -0.84
PDLIM5-222ENST00000615540 CLCN6P51797 869 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 C16orf86Q6ZW13 317 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 GSPT2Q8IYD1 628 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 ENGASEQ8NFI3 743 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 DEPTORQ8TB45 409 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 GLG1Q92896 1179 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 RIOK1Q9BRS2 568 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 ADRA2BP18089 450 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 RCAN1P53805 252 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 SUGCTQ9HAC7 445 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 STAT1P42224 750 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 ANKRD40Q6AI12 368 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 NCK2O43639 380 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 POLGP54098 1239 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 DALRD3Q5D0E6 543 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 MICALCLQ6ZW33 695 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 FAM186BQ8IYM0 893 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 PARD6BQ9BYG5 372 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 CDC23Q9UJX2 597 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 LRRC53A6NM62 1247 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 KRIT1O00522 736 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 FOSP01100 380 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 PIK3CAP42336 1068 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 KIF11P52732 1056 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms