RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	SPP2	Q13103	211 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	GPATCH11	Q8N954	259 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	KATNAL1	Q9BW62	490 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	LCMT1	Q9UIC8	334 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	PCDHA7	Q9UN72	937 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	DAGLA	Q9Y4D2	1042 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	OAT	P04181	439 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	MKRN3	Q13064	507 aa	Known RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	KIAA1841	Q6NSI8	718 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	BBS5	Q8N3I7	341 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	ARFGAP2	Q8N6H7	521 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	ARFGAP3	Q9NP61	516 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	SLC12A6	Q9UHW9	1150 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	SRPRB	Q9Y5M8	271 aa	Known RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	COG2	Q14746	738 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	CBX8	Q9HC52	389 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	ZKSCAN5	Q9Y2L8	839 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	UTP11	Q9Y3A2	253 aa	Known RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	EIF3CL	B5ME19	914 aa	Known RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	ATP2C2	O75185	946 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	ZNF75D	P51815	510 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	EIF3C	Q99613	913 aa	Known RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	TIPIN	Q9BVW5	301 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	RAB20	Q9NX57	234 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	PFAS	O15067	1338 aa		10.49	□□□□□ -0.73
NCAM1-222	ENST00000615285	NWD1	Q149M9	1564 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	CTNND1	O60716	968 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	SCARF1	Q14162	830 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	C12orf60	Q5U649	245 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	TRIM50	Q86XT4	487 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ANKRD13A	Q8IZ07	590 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ZNF280C	Q8ND82	737 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	URGCP	Q8TCY9	931 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RAET1E	Q8TD07	263 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	GRK7	Q8WTQ7	553 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	MYOZ2	Q9NPC6	264 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	LZTFL1	Q9NQ48	299 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	TNPO2	O14787	897 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ADCK5	Q3MIX3	580 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	LGSN	Q5TDP6	509 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	SIRT2	Q8IXJ6	389 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	TTC39C	Q8N584	583 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RUNDC3B	Q96NL0	473 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285		F5H6K3	240 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	KRT10	P13645	584 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ANXA13	P27216	316 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	KLRC3	Q07444	240 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	CUL4A	Q13619	759 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	MTERF2	Q49AM1	385 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ARMCX2	Q7L311	632 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ATG9A	Q7Z3C6	839 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	FBXO33	Q7Z6M2	555 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	AFAP1L2	Q8N4X5	818 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	C7orf31	Q8N865	590 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RPF1	Q9H9Y2	349 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RAVER2	Q9HCJ3	691 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ADARB2	Q9NS39	739 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ODF2L	Q9ULJ1	636 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	PLSCR1	O15162	318 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	SLFN14	P0C7P3	912 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	USP11	P51784	963 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	TAF1C	Q15572	869 aa	Predicted RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ARHGAP44	Q17R89	818 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RASEF	Q8IZ41	740 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	OR8K1	Q8NGG5	319 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	GIMAP7	Q8NHV1	300 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	CEP95	Q96GE4	821 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	CYP2D7	A0A087X1C5	515 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	GOLGA8CP	A6NN73	597 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	ZNF157	P51786	506 aa	Predicted RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	KRT81	Q14533	505 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RASA3	Q14644	834 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	INTS5	Q6P9B9	1019 aa	Known RBP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	RAB3IL1	Q8TBN0	382 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	NCAPG	Q9BPX3	1015 aa		10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
NCAM1-222	ENST00000615285	THAP12	O43422	761 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	SORBS3	O60504	671 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	ARL1	P40616	181 aa	Predicted RBP	10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	GMPS	P49915	693 aa	Predicted RBP	10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	CACNB3	P54284	484 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	XRRA1	Q6P2D8	792 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	RRAGA	Q7L523	313 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	MAP7D3	Q8IWC1	876 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	SAMD3	Q8N6K7	520 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	RDH13	Q8NBN7	331 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	TDRD7	Q8NHU6	1098 aa	Known RBP	10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	RPGRIP1	Q96KN7	1286 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	AMFR	Q9UKV5	643 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	DLAT	P10515	647 aa	Known RBP	10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	FAM173B	Q6P4H8	233 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	MXD3	Q9BW11	206 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	PSMD14	O00487	310 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	AFP	P02771	609 aa	Known RBP	10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	PLA2G4B	P0C869	781 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	GTF2A2	P52657	109 aa		10.47	□□□□□ -0.73
NCAM1-222	ENST00000615285	TERF1	P54274	439 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms