RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 TEX2Q8IWB9 1127 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 KCTD17Q8N5Z5 321 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 DHTKD1Q96HY7 919 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 GGA3Q9NZ52 723 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CRCPO75575 148 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 TSPY1Q01534 308 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 RNF180Q86T96 592 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 OR6J1Q8NGC5 347 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 PSMD1Q99460 953 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 RARBP10826 455 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 FOXO4P98177 505 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 PTK2Q05397 1052 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 DSTYKQ6XUX3 929 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF365Q70YC5 407 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 TADA2BQ86TJ2 420 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 IGSF22Q8N9C0 903 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 BEST2Q8NFU1 509 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 PRPF31Q8WWY3 499 aaKnown RBP10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 MTRQ99707 1265 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 SKIP12755 728 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 MAPK4P31152 587 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 KLHL30Q0D2K2 578 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 RABL6Q3YEC7 729 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 ANGEL2Q5VTE6 544 aaKnown RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 TBCKQ8TEA7 893 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM84BQ96KN1 310 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 TTC1Q99614 292 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 ITIH3Q06033 890 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 KIAA1024Q9UPX6 916 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 SPP2Q13103 211 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 CTR9Q6PD62 1173 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 C1orf228Q6PIY5 440 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 MMP1P03956 469 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 RPN1P04843 607 aaKnown RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 PARVGQ9HBI0 331 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 DAAM1Q9Y4D1 1078 aa10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 COL5A2P05997 1499 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-204ENST00000615230 A6NJR5 290 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 CSF1RP07333 972 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 MTERF2Q49AM1 385 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 COL23A1Q86Y22 540 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 DYNLL2Q96FJ2 89 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 DDX50Q9BQ39 737 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 PUS7LQ9H0K6 701 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 TBC1D7Q9P0N9 293 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 C3P01024 1663 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 A0A1W2PQ27 194 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 A0A1W2PQ64 194 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 A0A1W2PQD8 194 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 GIPC1O14908 333 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 SLC16A2P36021 539 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 PTH1RQ03431 593 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 RASA3Q14644 834 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 NEDD1Q8NHV4 660 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 APOL6Q9BWW8 343 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 CCDC63Q8NA47 563 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 GPR101Q96P66 508 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 BAG1Q99933 345 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 DCP1AQ9NPI6 582 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF9-204ENST00000615230 SKILP12757 684 aa10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 ME3Q16798 604 aa10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 EFCAB13Q8IY85 973 aa10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 GPC2Q8N158 579 aa10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 SPATA33Q96N06 139 aa10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 GBA2Q9HCG7 927 aaPredicted RBP10.65□□□□□ -0.71
TNFRSF9-204ENST00000615230 ABL1P00519 1130 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 EIF2AK2P19525 551 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 TMTC3Q6ZXV5 915 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 SERTAD1Q9UHV2 236 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 MAFGO15525 162 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 TRAPPC3O43617 180 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 USP11P51784 963 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 INHBEP58166 350 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 ADAM9Q13443 819 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 BBOF1Q8ND07 529 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 TLR7Q9NYK1 1049 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 UTP11Q9Y3A2 253 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 MAN1A1P33908 653 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms