RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DNAJC7Q99615 494 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 FAM217BQ9NTX9 383 aaPredicted RBP24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 GDF11O95390 407 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 RASA1P20936 1047 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 STX17P56962 302 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 NNTQ13423 1086 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 CCDC122Q5T0U0 273 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 CHADLQ6NUI6 762 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 GIMAP7Q8NHV1 300 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 CAGE1Q8TC20 777 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 CSRNP2Q9H175 543 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 A0A1W2PQC6 194 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 BTBD18B2RXH4 712 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 H0YHG0 523 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 NDUFAB1O14561 156 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 BMP15O95972 392 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 RDXP35241 583 aaKnown RBP24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 SUPT20HL1Q3ZLR7 823 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 ZNF444Q8N0Y2 327 aaPredicted RBP24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 IGDCC4Q8TDY8 1250 aa24.29■■□□□ 1.48
POLR2J3-220ENST00000613744 IFIT3O14879 490 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 MYBL2P10244 700 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 PCP11498 1178 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 EPHB4P54760 987 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 TSR1Q2NL82 804 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 MOB2Q70IA6 237 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 MICU3Q86XE3 530 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 CAVIN3Q969G5 261 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 SLC26A6Q9BXS9 759 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 HDAC6Q9UBN7 1215 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 HERC5Q9UII4 1024 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 TSPY2A6NKD2 308 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 MPHOSPH10O00566 681 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 FGRP09769 529 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 HERVK_113P62684 666 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 TFAP4Q01664 338 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 TMEM67Q5HYA8 995 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 PYM1Q9BRP8 204 aaKnown RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 UBAC1Q9BSL1 405 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 SWAP70Q9UH65 585 aa24.28■■□□□ 1.48
POLR2J3-220ENST00000613744 ORC4O43929 436 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 NMT2O60551 498 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 AKR1B1P15121 316 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 PRLRP16471 622 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 JAG1P78504 1218 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 SKIDA1Q1XH10 827 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 CERKLQ49MI3 558 aaPredicted RBP24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 PREPLQ4J6C6 727 aaPredicted RBP24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 TCP11X2Q5H9J9 407 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 SND1Q7KZF4 910 aaKnown RBP eCLIP24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 TRIM22Q8IYM9 498 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 PURBQ96QR8 312 aaKnown RBP24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 RUFY1Q96T51 708 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 LY9Q9HBG7 655 aa24.27■■□□□ 1.48
POLR2J3-220ENST00000613744 ENC1O14682 589 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 HSF2BPO75031 334 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 CYLC1P35663 651 aaPredicted RBP24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 CCT6AP40227 531 aaKnown RBP24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 SMTNP53814 917 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 C1orf131Q8NDD1 294 aaKnown RBP24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 CHP1Q99653 195 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 ZNF287Q9HBT7 754 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 SENP2Q9HC62 589 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 CTNND2Q9UQB3 1225 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 PCDHB6Q9Y5E3 794 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 TTLL12Q14166 644 aaPredicted RBP24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 TATDN1Q6P1N9 297 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 NFXL1Q6ZNB6 911 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 FERMT2Q96AC1 680 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 MCM8Q9UJA3 840 aa24.26■■□□□ 1.47
POLR2J3-220ENST00000613744 RNF225M0QZC1 329 aaPredicted RBP24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TBC1D12O60347 775 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TSPY3P0CV98 308 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TSPY8P0CW00 308 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 MEA1Q16626 185 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 DCAF15Q66K64 600 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 CLEC10AQ8IUN9 316 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 CCDC170Q8IYT3 715 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TSGA10Q9BZW7 698 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TRIM10Q9UDY6 481 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 CAPN11Q9UMQ6 739 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 LUC7L2Q9Y383 392 aaKnown RBP24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 ERICH2A1L162 156 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 PHF20L1A8MW92 1017 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 KCNJ18B7U540 433 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 ITGBL1O95965 494 aaPredicted RBP24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 MAP3K10Q02779 954 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 KCNJ12Q14500 433 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 KDM7AQ6ZMT4 941 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 KIAA1328Q86T90 577 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 ZKSCAN4Q969J2 545 aaPredicted RBP24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 WRNIP1Q96S55 665 aa24.25■■□□□ 1.47
POLR2J3-220ENST00000613744 TNKSO95271 1327 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 USP2O75604 605 aaPredicted RBP24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 DEXIO95424 95 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 NF2P35240 595 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 RCAN1P53805 252 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 PAK1Q13153 545 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 WLSQ5T9L3 541 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms