RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 MFSD10Q14728 455 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 GPNMBQ14956 572 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 KIAA0753Q2KHM9 967 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 CHST3Q7LGC8 479 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
LINC01138-204ENST00000613452 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 SPATA33Q96N06 139 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 MLXIPQ9HAP2 919 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 EYSQ5T1H1 3165 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
LINC01138-204ENST00000613452 CKBP12277 381 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 MCM5P33992 734 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 SP2Q02086 613 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CNKSR3Q6P9H4 555 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 LRRC8DQ7L1W4 858 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CUL5Q93034 780 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 INPP4AQ96PE3 977 aaPredicted RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 C16orf70Q9BSU1 422 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 RBM8AQ9Y5S9 174 aaKnown RBP11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CHD9Q3L8U1 2897 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
LINC01138-204ENST00000613452 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 H3BRB1 525 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 MAFGO15525 162 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 CAND2O75155 1236 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 GGPS1O95749 300 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 GNAT1P11488 350 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 IGFBP4P22692 258 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 ANTXR2P58335 489 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 MRPS9P82933 396 aaKnown RBP11.1□□□□□ -0.63
LINC01138-204ENST00000613452 IKBKEQ14164 716 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 NECTIN1Q15223 517 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 TRIM71Q2Q1W2 868 aaKnown RBP11.1□□□□□ -0.63
LINC01138-204ENST00000613452 HSDL1Q3SXM5 330 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 METTL7BQ6UX53 244 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 ZNF654Q8IZM8 581 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 USP38Q8NB14 1042 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
LINC01138-204ENST00000613452 ASB2Q96Q27 587 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 TUT1Q9H6E5 874 aaKnown RBP11.1□□□□□ -0.63
LINC01138-204ENST00000613452 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
LINC01138-204ENST00000613452 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 FIBPO43427 364 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 GTPBP6O43824 516 aaPredicted RBP11.09□□□□□ -0.63
LINC01138-204ENST00000613452 NBNO60934 754 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 MYOGP15173 224 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 HOXC8P31273 242 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 KCNJ6P48051 423 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 TAP1Q03518 808 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 AAK1Q2M2I8 961 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 SERINC5Q86VE9 423 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 RAD9AQ99638 391 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
LINC01138-204ENST00000613452 THEGQ9P2T0 379 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
LINC01138-204ENST00000613452 TAF6LQ9Y6J9 622 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
LINC01138-204ENST00000613452 C17orf102A2RUQ5 167 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 MEIS2O14770 477 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 PRC1O43663 620 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 TLL1O43897 1013 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 CA3P07451 260 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 UBA1P22314 1058 aaKnown RBP11.08□□□□□ -0.64
LINC01138-204ENST00000613452 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
LINC01138-204ENST00000613452 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 ZNF618Q5T7W0 954 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 RNF20Q5VTR2 975 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 IL31RAQ8NI17 732 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 ESYT1Q9BSJ8 1104 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 COG5Q9UP83 839 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 MTCH2Q9Y6C9 303 aa11.08□□□□□ -0.64
LINC01138-204ENST00000613452 RSPH10B2B2RC85 870 aa11.07□□□□□ -0.64
LINC01138-204ENST00000613452 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms