RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 Q9Y3F1 56 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 ALPK3Q96L96 1907 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 JAK2O60674 1132 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 FOSP01100 380 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 CST5P28325 142 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 GNA11P29992 359 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 NPY5RQ15761 445 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 COPS5Q92905 334 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 ANO3Q9BYT9 981 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 SH2B1Q9NRF2 756 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 DNAH12Q6ZR08 3092 aa12.96□□□□□ -0.33
CCL3L3-201ENST00000612839 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.33
CCL3L3-201ENST00000612839 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 STAM2O75886 525 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 NLRP5P59047 1200 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 XRRA1Q6P2D8 792 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 REXO1Q8N1G1 1221 aaKnown RBP12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 SPOCK2Q92563 424 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 SENP6Q9GZR1 1112 aaPredicted RBP12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 SPC25Q9HBM1 224 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 GJB4Q9NTQ9 266 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 DDX41Q9UJV9 622 aaKnown RBP12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 PHF24Q9UPV7 400 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.34
CCL3L3-201ENST00000612839 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 BEX3Q00994 111 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 KCNA10Q16322 511 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 GNASQ5JWF2 1037 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 TSEN34Q9BSV6 310 aaKnown RBP12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 PHF20Q9BVI0 1012 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 AP5M1Q9H0R1 490 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 KCNJ14Q9UNX9 436 aa12.95□□□□□ -0.34
CCL3L3-201ENST00000612839 MOXD2PA6NHM9 499 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 M0R2N6 131 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ASGR1P07306 291 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 TGFB3P10600 412 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ITGB5P18084 799 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ICAM3P32942 547 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 SREBF1P36956 1147 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ACLYP53396 1101 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 SP2Q02086 613 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ARHGAP1Q07960 439 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 SEMA3FQ13275 785 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 PCSK9Q8NBP7 692 aaKnown RBP12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 DAGLBQ8NCG7 672 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 WASF1Q92558 559 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 TMX3Q96JJ7 454 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 UBIAD1Q9Y5Z9 338 aa12.94□□□□□ -0.34
CCL3L3-201ENST00000612839 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 FIBPO43427 364 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 GH1P01241 217 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 MCM2P49736 904 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 HTATIP2Q9BUP3 242 aa12.93□□□□□ -0.34
CCL3L3-201ENST00000612839 A6NJR5 290 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 XBP1P17861 261 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 CPT1AP50416 773 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 LRRC26Q2I0M4 334 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 MYSM1Q5VVJ2 828 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 NLRX1Q86UT6 975 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
CCL3L3-201ENST00000612839 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms