RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 B4E1Z4 1266 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 EIF3JO75822 258 aaKnown RBP27.36■■□□□ 1.97
MMP28-203ENST00000612672 PARNO95453 639 aaKnown RBP27.36■■□□□ 1.97
MMP28-203ENST00000612672 HSDL1Q3SXM5 330 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 FBXO11Q86XK2 927 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 GPKOWQ92917 476 aaPredicted RBP eCLIP27.36■■□□□ 1.97
MMP28-203ENST00000612672 CRBNQ96SW2 442 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 MAF1Q9H063 256 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 RNF41Q9H4P4 317 aaPredicted RBP27.36■■□□□ 1.97
MMP28-203ENST00000612672 ARIH1Q9Y4X5 557 aaPredicted RBP27.36■■□□□ 1.97
MMP28-203ENST00000612672 MYO7AQ13402 2215 aa27.36■■□□□ 1.97
MMP28-203ENST00000612672 TRIM6-TRIM34B2RNG4 842 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 LGR5O75473 907 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 CFBP00751 764 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 KCNA5P22460 613 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 HSD17B4P51659 736 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 SP2Q02086 613 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 LAMC2Q13753 1193 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 IKBKEQ14164 716 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 ASPRV1Q53RT3 343 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 MCF2L2Q86YR7 1114 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 STAG2Q8N3U4 1231 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 DBF4BQ8NFT6 615 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 ZFP91Q96JP5 570 aaPredicted RBP27.35■■□□□ 1.97
MMP28-203ENST00000612672 KATNAL1Q9BW62 490 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 BCAS3Q9H6U6 928 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 KAT14Q9H8E8 782 aa27.35■■□□□ 1.97
MMP28-203ENST00000612672 MRPL11Q9Y3B7 192 aaKnown RBP27.35■■□□□ 1.97
MMP28-203ENST00000612672 BAZ2BQ9UIF8 2168 aaKnown RBP27.34■■□□□ 1.97
MMP28-203ENST00000612672 SDSP20132 328 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 LEXMQ3ZCV2 418 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 MYSM1Q5VVJ2 828 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 FAM178BQ8IXR5 827 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 DHX37Q8IY37 1157 aaKnown RBP27.34■■□□□ 1.97
MMP28-203ENST00000612672 RILPL2Q969X0 211 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 ZSCAN10Q96SZ4 725 aaPredicted RBP27.34■■□□□ 1.97
MMP28-203ENST00000612672 PDCD2LQ9BRP1 358 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 LNPKQ9C0E8 428 aa27.34■■□□□ 1.97
MMP28-203ENST00000612672 HTRA4P83105 476 aaPredicted RBP27.33■■□□□ 1.97
MMP28-203ENST00000612672 GHRHRQ02643 423 aa27.33■■□□□ 1.97
MMP28-203ENST00000612672 SLC35G1Q2M3R5 365 aa27.33■■□□□ 1.97
MMP28-203ENST00000612672 SERINC5Q86VE9 423 aa27.33■■□□□ 1.97
MMP28-203ENST00000612672 FBXO22Q8NEZ5 403 aa27.33■■□□□ 1.97
MMP28-203ENST00000612672 SP7Q8TDD2 431 aaPredicted RBP27.33■■□□□ 1.97
MMP28-203ENST00000612672 C16orf70Q9BSU1 422 aa27.33■■□□□ 1.97
MMP28-203ENST00000612672 ZNF213O14771 459 aa27.32■■□□□ 1.96
MMP28-203ENST00000612672 RRP1P56182 461 aaKnown RBP27.32■■□□□ 1.96
MMP28-203ENST00000612672 TICAM2Q86XR7 235 aa27.32■■□□□ 1.96
MMP28-203ENST00000612672 MYOCDQ8IZQ8 938 aa27.32■■□□□ 1.96
MMP28-203ENST00000612672 ZSWIM5Q9P217 1185 aa27.32■■□□□ 1.96
MMP28-203ENST00000612672 ZBTB47Q9UFB7 747 aaPredicted RBP27.32■■□□□ 1.96
MMP28-203ENST00000612672 RALGAPA2Q2PPJ7 1873 aa27.32■■□□□ 1.96
MMP28-203ENST00000612672 DHX16O60231 1041 aaKnown RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 EFCAB14O75071 495 aa27.31■■□□□ 1.96
MMP28-203ENST00000612672 GGPS1O95749 300 aa27.31■■□□□ 1.96
MMP28-203ENST00000612672 PARP1P09874 1014 aaKnown RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 MYCLP12524 364 aaPredicted RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 UBA1P22314 1058 aaKnown RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 HDAC1Q13547 482 aaPredicted RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 CELF3Q5SZQ8 465 aaKnown RBP27.31■■□□□ 1.96
MMP28-203ENST00000612672 IQCA1Q86XH1 822 aa27.31■■□□□ 1.96
MMP28-203ENST00000612672 COL4A6Q14031 1691 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 HOXA13P31271 388 aaPredicted RBP27.3■■□□□ 1.96
MMP28-203ENST00000612672 HOXC8P31273 242 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 THPOP40225 353 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 PLEKHG4Q58EX7 1191 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 GJD3Q8N144 294 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 MTMR8Q96EF0 704 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 SPATA33Q96N06 139 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 INSL6Q9Y581 213 aa27.3■■□□□ 1.96
MMP28-203ENST00000612672 PGM5Q15124 567 aa27.29■■□□□ 1.96
MMP28-203ENST00000612672 PTCRAQ6ISU1 281 aaPredicted RBP27.29■■□□□ 1.96
MMP28-203ENST00000612672 STOX1Q6ZVD7 989 aa27.29■■□□□ 1.96
MMP28-203ENST00000612672 TELO2Q9Y4R8 837 aa27.29■■□□□ 1.96
MMP28-203ENST00000612672 RSPH10B2B2RC85 870 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 H3BQ06 376 aaPredicted RBP27.28■■□□□ 1.96
MMP28-203ENST00000612672 PPFIA4O75335 1185 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 RSPH10BP0C881 870 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 EPC2Q52LR7 807 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 CWC27Q6UX04 472 aaKnown RBP27.28■■□□□ 1.96
MMP28-203ENST00000612672 VSIG10LQ86VR7 867 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 NEK9Q8TD19 979 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 MRPL38Q96DV4 380 aaKnown RBP27.28■■□□□ 1.96
MMP28-203ENST00000612672 IL25Q9H293 177 aa27.28■■□□□ 1.96
MMP28-203ENST00000612672 EMSYQ7Z589 1322 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.27■■□□□ 1.96
MMP28-203ENST00000612672 GRXCR2A6NFK2 248 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 TREHO43280 583 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 AMHP03971 560 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 AMNQ9BXJ7 453 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 MAD2L2Q9UI95 211 aa27.27■■□□□ 1.96
MMP28-203ENST00000612672 CTSHP09668 335 aa27.26■■□□□ 1.95
MMP28-203ENST00000612672 CCDC178Q5BJE1 867 aa27.26■■□□□ 1.95
MMP28-203ENST00000612672 LGALS2P05162 132 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 SMIM10L2AP0DMW4 78 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 SMIM10L2BP0DMW5 78 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 MFAP1P55081 439 aaKnown RBP27.25■■□□□ 1.95
MMP28-203ENST00000612672 SEC23AQ15436 765 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 CYB5R4Q7L1T6 521 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 PLEKHM2Q8IWE5 1019 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms