RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TGFB3P10600 412 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 MAGEA10P43363 369 aaPredicted RBP20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 CDK7P50613 346 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 SSRP1Q08945 709 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 ITGA7Q13683 1181 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 LAMC2Q13753 1193 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 SLC43A3Q8NBI5 491 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 PRO3102Q9H379 93 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 TMEM260Q9NX78 707 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 VPS54Q9P1Q0 977 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 GRIN2DO15399 1336 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 DCDC2CA8MYV0 355 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 SORBS3O60504 671 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 KPNA6O60684 536 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 CDKL5O76039 1030 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 DEXIO95424 95 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 SP2Q02086 613 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 CELF3Q5SZQ8 465 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 SH3RF1Q7Z6J0 888 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 NLRX1Q86UT6 975 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 FAM126BQ8IXS8 530 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 DHX37Q8IY37 1157 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 PPTC7Q8NI37 304 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 GPRASP2Q96D09 838 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 GDF15Q99988 308 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 C6orf50Q9HD87 102 aa20.69■□□□□ 0.9
SEMA3B-211ENST00000612509 TRIM43BA6NCK2 446 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 SPATA31C2B4DYI2 1134 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 LARGE1O95461 756 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 FAAP100Q0VG06 881 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 MYSM1Q5VVJ2 828 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 REXO1Q8N1G1 1221 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 TRIM43Q96BQ3 446 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 UBIAD1Q9Y5Z9 338 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 STK36Q9NRP7 1315 aa20.68■□□□□ 0.9
SEMA3B-211ENST00000612509 HOXD8P13378 290 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 ITGB5P18084 799 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 GNA11P29992 359 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 SREBF1P36956 1147 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 RBM25P49756 843 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 MDM2Q00987 491 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 NEDD9Q14511 834 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 DGKDQ16760 1214 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 ME3Q16798 604 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 JAKMIP3Q5VZ66 844 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 GTF3C6Q969F1 213 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 SPATA33Q96N06 139 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 KIF2CQ99661 725 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 SH3GLB2Q9NR46 395 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 TBX21Q9UL17 535 aa20.67■□□□□ 0.9
SEMA3B-211ENST00000612509 KIAA0355O15063 1070 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 ADAMTS3O15072 1205 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 TLR3O15455 904 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 HSDL1Q3SXM5 330 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 METTL7BQ6UX53 244 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 BICD2Q8TD16 824 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 CDHR1Q96JP9 859 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 LBHD1Q9BQE6 289 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 TMEM39AQ9NV64 488 aa20.66■□□□□ 0.9
SEMA3B-211ENST00000612509 CD4P01730 458 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 ZNF286BP0CG31 522 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 MTMR1Q13613 665 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 NECAB1Q8N987 351 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 RASGRP4Q8TDF6 673 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 KAT2BQ92831 832 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 AIFM3Q96NN9 605 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 SENP7Q9BQF6 1050 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 JADE2Q9NQC1 790 aa20.65■□□□□ 0.9
SEMA3B-211ENST00000612509 B4GALT4O60513 344 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 CTDNEP1O95476 244 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 F2P00734 622 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 KCNA2P16389 499 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 ITGB8P26012 769 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 BMP8BP34820 402 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 NLRP5P59047 1200 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 ARHGAP4P98171 946 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 NBPF20Q3BBV1 942 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 HABP4Q5JVS0 413 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 MCTP2Q6DN12 878 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 NFRKBQ6P4R8 1299 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 CYFIP1Q7L576 1253 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 MXRA8Q9BRK3 442 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 BCAS3Q9H6U6 928 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 GTF3C3Q9Y5Q9 886 aa20.64■□□□□ 0.89
SEMA3B-211ENST00000612509 NOP56O00567 594 aaKnown RBP20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 RAG1P15918 1043 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 CEP55Q53EZ4 464 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 FAM47CQ5HY64 1035 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 FAM177A1Q8N128 213 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 PPP1R13LQ8WUF5 828 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 CRYGNQ8WXF5 182 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 BADQ92934 168 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 PKD2L1Q9P0L9 805 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 TRIOBPQ9H2D6 2365 aa20.63■□□□□ 0.89
SEMA3B-211ENST00000612509 A0A1W2PPC1 479 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms