RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 GNA11P29992 359 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 REXO1Q8N1G1 1221 aaKnown RBP22.11■■□□□ 1.13
SRRM3-205ENST00000612155 DNAJC5GQ8N7S2 189 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 PAGE5Q96GU1 130 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ZFP91Q96JP5 570 aaPredicted RBP22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ZSWIM8A7E2V4 1837 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ESYT2A0FGR8 921 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ALDH1A1P00352 501 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 SLFN14P0C7P3 912 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 MRPL12P52815 198 aaKnown RBP22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ANKRD35Q8N283 1001 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 GTF3C2Q8WUA4 911 aaPredicted RBP22.11■■□□□ 1.13
SRRM3-205ENST00000612155 ARHGAP39Q9C0H5 1083 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 TMEM60Q9H2L4 133 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 GCOM1H8Y6P7 765 aaPredicted RBP22.1■■□□□ 1.13
SRRM3-205ENST00000612155 POLR2MP0CAP2 368 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 CTGFP29279 349 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 CAP1Q01518 475 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 E2F4Q16254 413 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 RNF207Q6ZRF8 634 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 SMARCE1Q969G3 411 aa22.1■■□□□ 1.13
SRRM3-205ENST00000612155 AFMP43652 599 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 CLK2P49760 499 aaKnown RBP22.09■■□□□ 1.13
SRRM3-205ENST00000612155 MYL5Q02045 173 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 CNTN2Q02246 1040 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 INF2Q27J81 1249 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 LRRC8AQ8IWT6 810 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 HTTP42858 3142 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 FANCCQ00597 558 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 CHST13Q8NET6 341 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 CYP39A1Q9NYL5 469 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 HOOK1Q9UJC3 728 aaKnown RBP22.09■■□□□ 1.13
SRRM3-205ENST00000612155 THSD7BQ9C0I4 1608 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 DOCK3Q8IZD9 2030 aa22.09■■□□□ 1.13
SRRM3-205ENST00000612155 SLC25A27O95847 323 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 CCNA1P78396 465 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 TRAF1Q13077 416 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 KANK3Q6NY19 840 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 FILIP1Q7Z7B0 1213 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 REM2Q8IYK8 340 aaPredicted RBP22.08■■□□□ 1.13
SRRM3-205ENST00000612155 SYTL5Q8TDW5 730 aaPredicted RBP22.08■■□□□ 1.13
SRRM3-205ENST00000612155 TAAR1Q96RJ0 339 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 MTRQ99707 1265 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 FANCLQ9NW38 375 aa22.08■■□□□ 1.13
SRRM3-205ENST00000612155 SMC2O95347 1197 aa22.08■■□□□ 1.12
SRRM3-205ENST00000612155 HSD17B4P51659 736 aa22.08■■□□□ 1.12
SRRM3-205ENST00000612155 GALNT17Q6IS24 598 aa22.08■■□□□ 1.12
SRRM3-205ENST00000612155 GPR142Q7Z601 462 aa22.08■■□□□ 1.12
SRRM3-205ENST00000612155 CCDC194A0A1B0GVG4 234 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 CDC25AP30304 524 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 DPYDQ12882 1025 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 TKFCQ3LXA3 575 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 PDXDC2PQ6P474 469 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 MCF2L2Q86YR7 1114 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 STAMQ92783 540 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 MMP19Q99542 508 aa22.07■■□□□ 1.12
SRRM3-205ENST00000612155 ARL6IP4Q66PJ3 421 aaKnown RBP22.06■■□□□ 1.12
SRRM3-205ENST00000612155 MROH8Q9H579 483 aa22.06■■□□□ 1.12
SRRM3-205ENST00000612155 ANO3Q9BYT9 981 aa22.06■■□□□ 1.12
SRRM3-205ENST00000612155 SPDYE3A6NKU9 549 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 TBCKQ8TEA7 893 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 FBXO40Q9UH90 709 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 PNMA2Q9UL42 364 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 RBBP6Q7Z6E9 1792 aaKnown RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 ASTN1O14525 1302 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 LCTP09848 1927 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 PIK3CDO00329 1044 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 FCER1AP12319 257 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 CD44P16070 742 aaKnown RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 EIF2AK2P19525 551 aaKnown RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 CCZ1BP86790 482 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 CCZ1P86791 482 aaPredicted RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 KCTD2Q14681 263 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 TRMT44Q8IYL2 757 aaKnown RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 TRIML1Q8N9V2 468 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 MLKLQ8NB16 471 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 SHCBP1Q8NEM2 672 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 IL31RAQ8NI17 732 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 UIMC1Q96RL1 719 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 ZNFX1Q9P2E3 1918 aaKnown RBP22.05■■□□□ 1.12
SRRM3-205ENST00000612155 PLXNB2O15031 1838 aa22.05■■□□□ 1.12
SRRM3-205ENST00000612155 EDIL3O43854 480 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 ADORA2AP29274 412 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 TPM4P67936 248 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 INTS13Q9NVM9 706 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 BRCA2P51587 3418 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 PP2D1A8MPX8 630 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 HSP90AA4PQ58FG1 418 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 TMC6Q7Z403 805 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 PLEKHH3Q7Z736 793 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 FAM177A1Q8N128 213 aaPredicted RBP22.04■■□□□ 1.12
SRRM3-205ENST00000612155 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
SRRM3-205ENST00000612155 MYH7BA7E2Y1 1941 aa22.03■■□□□ 1.12
SRRM3-205ENST00000612155 COBLO75128 1261 aa22.03■■□□□ 1.12
SRRM3-205ENST00000612155 LONP1P36776 959 aaKnown RBP22.03■■□□□ 1.12
SRRM3-205ENST00000612155 LACTBP83111 547 aaPredicted RBP22.03■■□□□ 1.12
SRRM3-205ENST00000612155 NONOQ15233 471 aaKnown RBP eCLIP22.03■■□□□ 1.12
SRRM3-205ENST00000612155 PTPN21Q16825 1174 aa22.03■■□□□ 1.12
SRRM3-205ENST00000612155 ARMCX5Q6P1M9 558 aa22.03■■□□□ 1.12
SRRM3-205ENST00000612155 TRIM47Q96LD4 638 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms