RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 FTOQ9C0B1 505 aaKnown RBP eCLIP20.4■□□□□ 0.86
MUC1-224ENST00000611577 RBM28Q9NW13 759 aaKnown RBP20.4■□□□□ 0.86
MUC1-224ENST00000611577 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 MTCH2Q9Y6C9 303 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 SCN10AQ9Y5Y9 1956 aa20.39■□□□□ 0.86
MUC1-224ENST00000611577 PITPNM1O00562 1244 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 NKRFO15226 690 aaKnown RBP eCLIP20.39■□□□□ 0.85
MUC1-224ENST00000611577 BMP1P13497 986 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 KCNQ1P51787 676 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 RTN1Q16799 776 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 NFRKBQ6P4R8 1299 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 SCFD2Q8WU76 684 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 PIBF1Q8WXW3 757 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 COPS5Q92905 334 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 JMJD4Q9H9V9 463 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 NOD1Q9Y239 953 aa20.39■□□□□ 0.85
MUC1-224ENST00000611577 PRRC2BQ5JSZ5 2229 aaKnown RBP20.39■□□□□ 0.85
MUC1-224ENST00000611577 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
MUC1-224ENST00000611577 EPOPA6NHQ4 379 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 KPNA6O60684 536 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 IQCF3P0C7M6 154 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 METAP2P50579 478 aaKnown RBP eCLIP20.38■□□□□ 0.85
MUC1-224ENST00000611577 CHMP4BP1P59074 171 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 RPS6P62753 249 aaKnown RBP20.38■□□□□ 0.85
MUC1-224ENST00000611577 QRICH1Q2TAL8 776 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 FBXO11Q86XK2 927 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 ARNTL2Q8WYA1 636 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 RRP36Q96EU6 259 aaKnown RBP20.38■□□□□ 0.85
MUC1-224ENST00000611577 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
MUC1-224ENST00000611577 TANC1Q9C0D5 1861 aa20.38■□□□□ 0.85
MUC1-224ENST00000611577 A6NJR5 290 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 ZBTB5O15062 677 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 TXNP10599 105 aaKnown RBP20.37■□□□□ 0.85
MUC1-224ENST00000611577 POU3F3P20264 500 aaPredicted RBP20.37■□□□□ 0.85
MUC1-224ENST00000611577 EDNRBP24530 442 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 PTPN11Q06124 597 aaPredicted RBP20.37■□□□□ 0.85
MUC1-224ENST00000611577 TRAF1Q13077 416 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 BFSP2Q13515 415 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 HERC6Q8IVU3 1022 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 DNERQ8NFT8 737 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 PHOSPHO2Q8TCD6 241 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 PIGSQ96S52 555 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 AMNQ9BXJ7 453 aa20.37■□□□□ 0.85
MUC1-224ENST00000611577 TCF20Q9UGU0 1960 aaKnown RBP20.37■□□□□ 0.85
MUC1-224ENST00000611577 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 ARHGEF15O94989 841 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 RCAN1P53805 252 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 ANKRD1Q15327 319 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 KRT40Q6A162 431 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 FBXL16Q8N461 479 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 RIOX1Q9H6W3 641 aa20.36■□□□□ 0.85
MUC1-224ENST00000611577 ABCB11O95342 1321 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 B4DLN1 442 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 ARIH2O95376 493 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 SMARCA1P28370 1054 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 MRPL12P52815 198 aaKnown RBP20.35■□□□□ 0.85
MUC1-224ENST00000611577 TAP1Q03518 808 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 TMTC3Q6ZXV5 915 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 CMTR1Q8N1G2 835 aaKnown RBP20.35■□□□□ 0.85
MUC1-224ENST00000611577 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
MUC1-224ENST00000611577 PNMA6FA0A0J9YX94 578 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 CYTH3O43739 400 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 BAIAP3O94812 1187 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 NEK4P51957 841 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 TOB2Q14106 344 aaPredicted RBP20.34■□□□□ 0.85
MUC1-224ENST00000611577 SRBD1Q8N5C6 995 aaKnown RBP20.34■□□□□ 0.85
MUC1-224ENST00000611577 CCDC155Q8N6L0 562 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 LARP6Q9BRS8 491 aaKnown RBP20.34■□□□□ 0.85
MUC1-224ENST00000611577 C1QTNF1Q9BXJ1 281 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 COG5Q9UP83 839 aa20.34■□□□□ 0.85
MUC1-224ENST00000611577 MRPL11Q9Y3B7 192 aaKnown RBP20.34■□□□□ 0.85
MUC1-224ENST00000611577 TLL1O43897 1013 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 PLA2G5P39877 138 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 KCNJ6P48051 423 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 PTGISQ16647 500 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 IL17RAQ96F46 866 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 PCDHA1Q9Y5I3 950 aa20.33■□□□□ 0.85
MUC1-224ENST00000611577 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
MUC1-224ENST00000611577 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
MUC1-224ENST00000611577 CCT2P78371 535 aaKnown RBP20.32■□□□□ 0.84
MUC1-224ENST00000611577 STK3Q13188 491 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 GRB10Q13322 594 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 MCF2L2Q86YR7 1114 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 CAGE1Q8TC20 777 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 AFAP1L1Q8TED9 768 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 AFG1LQ8WV93 481 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 FAM122AQ96E09 287 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 MTMR8Q96EF0 704 aa20.32■□□□□ 0.84
MUC1-224ENST00000611577 CPLX1O14810 134 aa20.31■□□□□ 0.84
MUC1-224ENST00000611577 MMP3P08254 477 aa20.31■□□□□ 0.84
MUC1-224ENST00000611577 CDC27P30260 824 aa20.31■□□□□ 0.84
MUC1-224ENST00000611577 AK2P54819 239 aa20.31■□□□□ 0.84
MUC1-224ENST00000611577 AKAP17AQ02040 695 aaKnown RBP20.31■□□□□ 0.84
MUC1-224ENST00000611577 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
MUC1-224ENST00000611577 SPRED2Q7Z698 418 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms