RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ARHGAP25P42331 645 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 SNAP25P60880 206 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 ATRIPQ8WXE1 791 aa13.26□□□□□ -0.29
SRRT-213ENST00000611405 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
SRRT-213ENST00000611405 A0A1W2PRG0 241 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 USH1GQ495M9 461 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 WDR59Q6PJI9 974 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 EEF2KMTQ96G04 330 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 ZNF70Q9UC06 446 aaPredicted RBP13.25□□□□□ -0.29
SRRT-213ENST00000611405 CTAGE9A4FU28 777 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRRT-213ENST00000611405 CIITAP33076 1130 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 KRT83P78385 493 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 PRR16Q569H4 304 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 GMLQ99445 158 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
SRRT-213ENST00000611405 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
SRRT-213ENST00000611405 E9PMD0 336 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 PIK3CDO00329 1044 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 KIF20AO95235 890 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
SRRT-213ENST00000611405 CDK17Q00537 523 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
SRRT-213ENST00000611405 ZNF662Q6ZS27 426 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 NDST4Q9H3R1 872 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
SRRT-213ENST00000611405 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 TMX2Q9Y320 296 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 POTECB2RU33 542 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 CYP3A4P08684 503 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
SRRT-213ENST00000611405 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 SLC35F6Q8N357 371 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 HAUS4Q9H6D7 363 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 GOPCQ9HD26 462 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 AGPAT5Q9NUQ2 364 aa13.24□□□□□ -0.29
SRRT-213ENST00000611405 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
SRRT-213ENST00000611405 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 PSMD14O00487 310 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 MED24O75448 989 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 STAT3P40763 770 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 KLK7P49862 253 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 STAT2P52630 851 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 CBX1P83916 185 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 SPIRE1Q08AE8 756 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 LRRC41Q15345 812 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 RSRC2Q7L4I2 434 aaKnown RBP13.23□□□□□ -0.29
SRRT-213ENST00000611405 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 NAPGQ99747 312 aaPredicted RBP13.23□□□□□ -0.29
SRRT-213ENST00000611405 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 CYP11B2P19099 503 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
SRRT-213ENST00000611405 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 ZCWPW2Q504Y3 356 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 GPR161Q8N6U8 529 aaKnown RBP13.23□□□□□ -0.29
SRRT-213ENST00000611405 CEP112Q8N8E3 955 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 GOLGA1Q92805 767 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 LENG9Q96B70 501 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 CEP63Q96MT8 703 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 SIK3Q9Y2K2 1263 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 PCDHA2Q9Y5H9 948 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 PSME4Q14997 1843 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 OPLAHO14841 1288 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 RAD17O75943 681 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 RABGGTAQ92696 567 aa13.23□□□□□ -0.29
SRRT-213ENST00000611405 FRMD3A2A2Y4 597 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 TBC1D12O60347 775 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 GNA14O95837 355 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 RPA1P27694 616 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 TUBB4BP68371 445 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 SRGAP1Q7Z6B7 1085 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 SPICE1Q8N0Z3 855 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 UIMC1Q96RL1 719 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms