RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 FAM186BQ8IYM0 893 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 GSDMAQ96QA5 445 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 BUB1BO60566 1050 aaPredicted RBP17.02■□□□□ 0.32
TNXB-208ENST00000611016 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 ARPP19P56211 112 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 TFAMQ00059 246 aaKnown RBP17.02■□□□□ 0.32
TNXB-208ENST00000611016 BFSP1Q12934 665 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 UBN2Q6ZU65 1347 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
TNXB-208ENST00000611016 GH2P01242 217 aa17.02■□□□□ 0.32
TNXB-208ENST00000611016 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 GOLGA8QA0A0J9YX86 632 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 GOLGA8OA6NCC3 632 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 GOLGA8NF8WBI6 632 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 IGSF3O75054 1194 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 OSTNP61366 133 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.31
TNXB-208ENST00000611016 ANKRD42Q8N9B4 389 aa17.02■□□□□ 0.31
TNXB-208ENST00000611016 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.31
TNXB-208ENST00000611016 ARHGEF2Q92974 986 aaKnown RBP17.02■□□□□ 0.31
TNXB-208ENST00000611016 MUM1L1Q5H9M0 696 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 KIAA1841Q6NSI8 718 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 RINT1Q6NUQ1 792 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 MARK3P27448 753 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 MCAMP43121 646 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 PSMD6Q15008 389 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 TRMT2AQ8IZ69 625 aaKnown RBP17.01■□□□□ 0.31
TNXB-208ENST00000611016 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 STX2P32856 288 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 MED4Q9NPJ6 270 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 TBC1D9BQ66K14 1250 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 PDXDC2PQ6P474 469 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 TMEM179Q6ZVK1 233 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 DPH5Q9H2P9 285 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 H7C0C1 242 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 AFPP02771 609 aaKnown RBP17.01■□□□□ 0.31
TNXB-208ENST00000611016 LMNB1P20700 586 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 CDC25AP30304 524 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 ATP5OP48047 213 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 KIF23Q02241 960 aaPredicted RBP17.01■□□□□ 0.31
TNXB-208ENST00000611016 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 FAM149B1Q96BN6 582 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 TMEM206Q9H813 350 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
TNXB-208ENST00000611016 ECE2O60344 883 aa17■□□□□ 0.31
TNXB-208ENST00000611016 CTNNA1P35221 906 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 P2RX5Q93086 422 aa17■□□□□ 0.31
TNXB-208ENST00000611016 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
TNXB-208ENST00000611016 ZNF148Q9UQR1 794 aa17■□□□□ 0.31
TNXB-208ENST00000611016 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
TNXB-208ENST00000611016 DHTKD1Q96HY7 919 aaPredicted RBP17■□□□□ 0.31
TNXB-208ENST00000611016 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
TNXB-208ENST00000611016 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
TNXB-208ENST00000611016 ASNSP08243 561 aa17■□□□□ 0.31
TNXB-208ENST00000611016 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 MESDQ14696 234 aa17■□□□□ 0.31
TNXB-208ENST00000611016 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
TNXB-208ENST00000611016 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
TNXB-208ENST00000611016 RILPQ96NA2 401 aa17■□□□□ 0.31
TNXB-208ENST00000611016 VCX3AQ9NNX9 186 aa17■□□□□ 0.31
TNXB-208ENST00000611016 COL15A1P39059 1388 aa17■□□□□ 0.31
TNXB-208ENST00000611016 OAS2P29728 719 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 RASSF7Q02833 373 aa17■□□□□ 0.31
TNXB-208ENST00000611016 MAP7D3Q8IWC1 876 aa17■□□□□ 0.31
TNXB-208ENST00000611016 GRAMD1CQ8IYS0 662 aa17■□□□□ 0.31
TNXB-208ENST00000611016 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 KLHL14Q9P2G3 628 aa17■□□□□ 0.31
TNXB-208ENST00000611016 NAA25Q14CX7 972 aa17■□□□□ 0.31
TNXB-208ENST00000611016 IPO11Q9UI26 975 aaKnown RBP17■□□□□ 0.31
TNXB-208ENST00000611016 SEPT2Q15019 361 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 RFX6Q8HWS3 928 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 NXF1Q9UBU9 619 aaKnown RBP16.99■□□□□ 0.31
TNXB-208ENST00000611016 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 SRGAP2CP0DJJ0 459 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 SAT1P21673 171 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 RPAP1Q9BWH6 1393 aaPredicted RBP16.99■□□□□ 0.31
TNXB-208ENST00000611016 TYW5A2RUC4 315 aaKnown RBP16.99■□□□□ 0.31
TNXB-208ENST00000611016 MYO1FO00160 1098 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 IFNAR1P17181 557 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 HAUS8Q9BT25 410 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 KDM6BO15054 1643 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 CCDC38Q502W7 563 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.99■□□□□ 0.31
TNXB-208ENST00000611016 RNF10Q8N5U6 811 aaKnown RBP16.99■□□□□ 0.31
TNXB-208ENST00000611016 CCDC68Q9H2F9 335 aa16.99■□□□□ 0.31
TNXB-208ENST00000611016 EPN1Q9Y6I3 576 aaPredicted RBP16.99■□□□□ 0.31
TNXB-208ENST00000611016 ATP8B1O43520 1251 aa16.98■□□□□ 0.31
TNXB-208ENST00000611016 ZNF500O60304 480 aaPredicted RBP16.98■□□□□ 0.31
TNXB-208ENST00000611016 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms