RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 TEX9Q8N6V9 391 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 DYDC1Q8WWB3 177 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 SLC35B4Q969S0 331 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
CTCFL-217ENST00000608425 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 SRRM3A6NNA2 597 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 ORC4O43929 436 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 KRT31Q15323 416 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 INF2Q27J81 1249 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 GCOM1H8Y6P7 765 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 CSF1RP07333 972 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 MRPS35P82673 323 aaKnown RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-217ENST00000608425 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 ARFGAP2Q8N6H7 521 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
CTCFL-217ENST00000608425 LRP5O75197 1615 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
CTCFL-217ENST00000608425 ETS2P15036 469 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CCNFP41002 786 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SARSP49591 514 aaKnown RBP13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SETDB1Q15047 1291 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 UAP1Q16222 522 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-217ENST00000608425 P3H1Q32P28 736 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 MCMDC2Q4G0Z9 681 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SPATA1Q5VX52 437 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 KLHL29Q96CT2 875 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 IFT43Q96FT9 208 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SUN2Q9UH99 717 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CFAP73A6NFT4 308 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 MOCS3O95396 460 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 GSTT1P30711 240 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 MSH2P43246 934 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 AFMP43652 599 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 RAD23BP54727 409 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LRRC24Q50LG9 513 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LMNTD2Q8IXW0 634 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 CCDC155Q8N6L0 562 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 P3H4Q92791 437 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-217ENST00000608425 PAG1Q9NWQ8 432 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LRRC42Q9Y546 428 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 LAMA4Q16363 1823 aa13.03□□□□□ -0.32
CTCFL-217ENST00000608425 PFDN1O60925 122 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 HSD17B3P37058 310 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 GJA8P48165 433 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 PLOD1Q02809 727 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-217ENST00000608425 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.32
CTCFL-217ENST00000608425 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.32
CTCFL-217ENST00000608425 H0Y3Z8 333 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 KRT86O43790 486 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 SUPT3HO75486 399 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 DESP17661 470 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 EXOSC10Q01780 885 aaKnown RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 KLC1Q07866 573 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 LBRQ14739 615 aaKnown RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 HOOK3Q86VS8 718 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 KCNN1Q92952 543 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 USH1CQ9Y6N9 552 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 H0YGN5 161 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 GNA14O95837 355 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 GSTA1P08263 222 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 VIMP08670 466 aaKnown RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 GNAZP19086 355 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 SERPINB4P48594 390 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 CCNG1P51959 295 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 IFT20Q8IY31 132 aa13.02□□□□□ -0.33
CTCFL-217ENST00000608425 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-217ENST00000608425 ANKRD13CQ8N6S4 541 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms