RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
CTSA-216ENST00000607212 LCHNA4D1U4 455 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
CTSA-216ENST00000607212 NBNO60934 754 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 F2P00734 622 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 THPOP40225 353 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
CTSA-216ENST00000607212 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
CTSA-216ENST00000607212 PGM5Q15124 567 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 RUFY2Q8WXA3 655 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 PIGSQ96S52 555 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 COG5Q9UP83 839 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 VCANP13611 3396 aa17.23■□□□□ 0.35
CTSA-216ENST00000607212 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 EFCAB14O75071 495 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 WTAPQ15007 396 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 CELF3Q5SZQ8 465 aaKnown RBP17.22■□□□□ 0.35
CTSA-216ENST00000607212 ZNF618Q5T7W0 954 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 HLA-CQ95604 372 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 CTAGE1Q96RT6 745 aa17.22■□□□□ 0.35
CTSA-216ENST00000607212 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
CTSA-216ENST00000607212 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CTSA-216ENST00000607212 C17orf102A2RUQ5 167 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 PALM3A6NDB9 673 aaPredicted RBP17.21■□□□□ 0.35
CTSA-216ENST00000607212 OPLAHO14841 1288 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 PPP1R11O60927 126 aaPredicted RBP17.21■□□□□ 0.35
CTSA-216ENST00000607212 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 CXCL10P02778 98 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 BMP1P13497 986 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
CTSA-216ENST00000607212 GRM4Q14833 912 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 SEC23AQ15436 765 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 GNPTABQ3T906 1256 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 MYOCDQ8IZQ8 938 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 SAMD3Q8N6K7 520 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 RAD9AQ99638 391 aa17.21■□□□□ 0.35
CTSA-216ENST00000607212 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 HAS3O00219 553 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 LGR5O75473 907 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 GJB5O95377 273 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 AMHP03971 560 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 POU3F3P20264 500 aaPredicted RBP17.2■□□□□ 0.34
CTSA-216ENST00000607212 RBL2Q08999 1139 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 VSIG10LQ86VR7 867 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 WNT8BQ93098 351 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
CTSA-216ENST00000607212 IL25Q9H293 177 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
CTSA-216ENST00000607212 DOCK5Q9H7D0 1870 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 RGS20O76081 388 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 SP4Q02446 784 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 GPNMBQ14956 572 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
CTSA-216ENST00000607212 CUL5Q93034 780 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 CHD9Q3L8U1 2897 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 SIP14410 1827 aa17.19■□□□□ 0.34
CTSA-216ENST00000607212 SPTBN5Q9NRC6 3674 aaKnown RBP17.18■□□□□ 0.34
CTSA-216ENST00000607212 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 H3BRB1 525 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 CYP21A2P08686 494 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 CTSHP09668 335 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 SMIM10L2AP0DMW4 78 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 SMIM10L2BP0DMW5 78 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 TGFB3P10600 412 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 SP2Q02086 613 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 UTP14CQ5TAP6 766 aaKnown RBP17.18■□□□□ 0.34
CTSA-216ENST00000607212 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
CTSA-216ENST00000607212 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
CTSA-216ENST00000607212 LINC01553A4QN01 128 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 LGALS2P05162 132 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 GHRHRQ02643 423 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 PTH1RQ03431 593 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 NEDD9Q14511 834 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 TRIM71Q2Q1W2 868 aaKnown RBP17.17■□□□□ 0.34
CTSA-216ENST00000607212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
CTSA-216ENST00000607212 CYFIP1Q7L576 1253 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 DBF4BQ8NFT6 615 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 CTCFLQ8NI51 663 aaPredicted RBP17.17■□□□□ 0.34
CTSA-216ENST00000607212 SEPT8Q92599 483 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 RIOX1Q9H6W3 641 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms