RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 EOMESO95936 686 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 GNAI3P08754 354 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 C1QTNF9P0C862 333 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 MAPK1P28482 360 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 LMAN1P49257 510 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 AARSP49588 968 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 MRPL12P52815 198 aaKnown RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 CRYMQ14894 314 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 ECM1Q16610 540 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 LONRF2Q1L5Z9 754 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 BEND6Q5SZJ8 279 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 WLSQ5T9L3 541 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 LRCH2Q5VUJ6 765 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 TMC7Q7Z402 723 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 UBE3DQ7Z6J8 389 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 TICAM2Q86XR7 235 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 SIAH1Q8IUQ4 282 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 FMNL3Q8IVF7 1028 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 ABHD4Q8TB40 342 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 GRIN3AQ8TCU5 1115 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 BICD2Q8TD16 824 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 SGSM3Q96HU1 749 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 NECAB3Q96P71 396 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 ALPK1Q96QP1 1244 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 TEX13AQ9BXU3 409 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 PARD6BQ9BYG5 372 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 ACBD3Q9H3P7 528 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 GNL3LQ9NVN8 582 aaKnown RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 ANO10Q9NW15 660 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLAMF8Q9P0V8 285 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 GGA2Q9UJY4 613 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 PALD1Q9ULE6 856 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 SETD1AO15047 1707 aaKnown RBP4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 IFT172Q9UG01 1749 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 GLI2P10070 1586 aa4.65□□□□□ -1.67
HMGB1P50-201ENST00000605814 SRRM3A6NNA2 597 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 B8ZZF3 427 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 CHUKO15111 745 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 SHOX2O60902 331 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ERLIN1O75477 346 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ERLIN2O94905 339 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 MAPK8P45983 427 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 HNRNPMP52272 730 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 EVCP57679 992 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 SETQ01105 290 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PLCB3Q01970 1234 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ICA1Q05084 483 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 GRIK3Q13003 919 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 NEDD9Q14511 834 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 STX1AQ16623 288 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PREPLQ4J6C6 727 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 GORABQ5T7V8 394 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ISM2Q6H9L7 571 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 MPRIPQ6WCQ1 1025 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 RUFY3Q7L099 469 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 FAM214BQ7L5A3 538 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 YTHDF3Q7Z739 585 aaKnown RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ANKRD18AQ8IVF6 992 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 AMOTL1Q8IY63 956 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 MFSD2AQ8NA29 543 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PRPF38AQ8NAV1 312 aaKnown RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 CTCFLQ8NI51 663 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 TCP11Q8WWU5 503 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 GOLGA1Q92805 767 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ERCC4Q92889 916 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ITFG2Q969R8 447 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 SYTL4Q96C24 671 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PAGR1Q9BTK6 254 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 NAT10Q9H0A0 1025 aaKnown RBP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 TOMM22Q9NS69 142 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 HYPKQ9NX55 129 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 DACT1Q9NYF0 836 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 DCTN4Q9UJW0 460 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 RCOR1Q9UKL0 485 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 CFAP45Q9UL16 551 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PPM1HQ9ULR3 514 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 MRFAP1Q9Y605 127 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ADGRB1O14514 1584 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 HECW2Q9P2P5 1572 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 PREX2Q70Z35 1606 aa4.64□□□□□ -1.67
HMGB1P50-201ENST00000605814 ATP10BO94823 1461 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 CDK12Q9NYV4 1490 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 H3BQF6 201 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 EXOC5O00471 708 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ENC1O14682 589 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 IKBKBO14920 756 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 FIBPO43427 364 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 NUAK1O60285 661 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 RTN2O75298 545 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 FSBPO95073 299 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 GCFC2P16383 781 aaKnown RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 GPTP24298 496 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 GJB2P29033 226 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 FNTAP49354 379 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 AK2P54819 239 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ATP2B2Q01814 1243 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 SART3Q15020 963 aaKnown RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ANKRD1Q15327 319 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms