RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 SAMSN1Q9NSI8 373 aaKnown RBP21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 VAV3Q9UKW4 847 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 RLFQ13129 1914 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 TRAF5O00463 557 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 CHMP2AO43633 222 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 ITGB5P18084 799 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 PRCPP42785 496 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 LRCH2Q5VUJ6 765 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 PKD2L1Q9P0L9 805 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 CTNND2Q9UQB3 1225 aa21.5■■□□□ 1.03
TUBB4B-202ENST00000604929 POTEFA5A3E0 1075 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 EML1O00423 815 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 SERPINC1P01008 464 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 CDK11BP21127 795 aaKnown RBP21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 CYP4A11Q02928 519 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 PDE4DQ08499 809 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 POTEGQ6S5H5 508 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 POTEEQ6S8J3 1075 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 OTOP1Q7RTM1 612 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 HPS3Q969F9 1004 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 MRFAP1L1Q96HT8 127 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 MXRA8Q9BRK3 442 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 ZNF577Q9BSK1 485 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 WDR11Q9BZH6 1224 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 NT5C3AQ9H0P0 336 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 PNMA2Q9UL42 364 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 PARP14Q460N5 1801 aa21.49■■□□□ 1.03
TUBB4B-202ENST00000604929 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 RHOBTB3O94955 611 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 MYCLP12524 364 aaPredicted RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 KCNB1Q14721 858 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 TEX13BQ9BXU2 312 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 MAP3K20Q9NYL2 800 aaKnown RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 RPTORQ8N122 1335 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 KDM3AQ9Y4C1 1321 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 SPATA31C1P0DKV0 1188 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 OAZ1P54368 228 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 PSMC6P62333 389 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 MRPS9P82933 396 aaKnown RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 GHRHRQ02643 423 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 HYIQ5T013 277 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 HAUS3Q68CZ6 603 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 CCDC186Q7Z3E2 898 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 ARMC9Q7Z3E5 817 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 ERMNQ8TAM6 284 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 DDX12PQ92771 950 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 RGL1Q9NZL6 768 aa21.48■■□□□ 1.03
TUBB4B-202ENST00000604929 PSMD10O75832 226 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 FCER1AP12319 257 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 STK4Q13043 487 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 ARHGEF16Q5VV41 709 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 ZSCAN30Q86W11 494 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 SLC5A5Q92911 643 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 OPTNQ96CV9 577 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 RRAGDQ9NQL2 400 aaPredicted RBP21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 KCNH7Q9NS40 1196 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 EXOC1Q9NV70 894 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 OTOFQ9HC10 1997 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 SYNRGQ9UMZ2 1314 aa21.47■■□□□ 1.03
TUBB4B-202ENST00000604929 SPDYE5A6NIY4 337 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 GOLGA6L6A8MZA4 724 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 DDX39AO00148 427 aaKnown RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 GAS7O60861 476 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 IDEP14735 1019 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 RPA1P27694 616 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 UBASH3AP57075 661 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 PGM5Q15124 567 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 CT47A1Q5JQC4 288 aaPredicted RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 SPATA1Q5VX52 437 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 NELFBQ8WX92 580 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 EIF2AK1Q9BQI3 630 aaKnown RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 A0A0G2JLL6 359 aaPredicted RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 IPO5O00410 1097 aaKnown RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 PLA2G4BP0C869 781 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 PTGS1P23219 599 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 PCNX4Q63HM2 1172 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 PRRT2Q7Z6L0 340 aaPredicted RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 GIMAP8Q8ND71 665 aaPredicted RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 CCDC47Q96A33 483 aaKnown RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 NAP1L5Q96NT1 182 aaPredicted RBP21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 RRAGCQ9HB90 399 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 RABGAP1Q9Y3P9 1069 aa21.46■■□□□ 1.03
TUBB4B-202ENST00000604929 CDC25BP30305 580 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 SETQ01105 290 aaPredicted RBP21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 RAD51AP2Q09MP3 1159 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 PAK1Q13153 545 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 PTPN21Q16825 1174 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 TPD52L1Q16890 204 aaPredicted RBP21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 CCDC144BQ3MJ40 725 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 FILIP1Q7Z7B0 1213 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 ADSSL1Q8N142 457 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 SLC39A2Q9NP94 309 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 PXMP2Q9NR77 195 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 SCN4AP35499 1836 aa21.45■■□□□ 1.02
TUBB4B-202ENST00000604929 CXCL11O14625 94 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms