RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 AFG1LQ8WV93 481 aa27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 BADQ92934 168 aa27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 RNF26Q9BY78 433 aaPredicted RBP27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 ESYT2A0FGR8 921 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 SPATA31C2B4DYI2 1134 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 IFNAR1P17181 557 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 PDIA3P30101 505 aaKnown RBP27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 AKAP17AQ02040 695 aaKnown RBP27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 AP3B2Q13367 1082 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 MFSD5Q6N075 450 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 SESTD1Q86VW0 696 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 GPRASP2Q96D09 838 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 MYH7BA7E2Y1 1941 aa27.24■■□□□ 1.95
SSX2IP-209ENST00000603677 SCG2P13521 617 aa27.23■■□□□ 1.95
SSX2IP-209ENST00000603677 PTGS1P23219 599 aa27.23■■□□□ 1.95
SSX2IP-209ENST00000603677 TMEM199Q8N511 208 aa27.23■■□□□ 1.95
SSX2IP-209ENST00000603677 hCG_1642624A0A1W2PR95 340 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 STXBP3O00186 592 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 ADCY7P51828 1080 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 FPGSQ05932 587 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 GPKOWQ92917 476 aaPredicted RBP eCLIP27.22■■□□□ 1.953e-7■■■□□ 17.5
SSX2IP-209ENST00000603677 MLXIPQ9HAP2 919 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 PCDHA6Q9UN73 950 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 PCDHA8Q9Y5H6 950 aa27.22■■□□□ 1.95
SSX2IP-209ENST00000603677 SMCO2A6NFE2 343 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 UBA1P22314 1058 aaKnown RBP27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 PPIGQ13427 754 aaKnown RBP eCLIP27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 TOB2Q14106 344 aaPredicted RBP27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 ANKRD1Q15327 319 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 NTRK3Q16288 839 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 NBPF20Q3BBV1 942 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 CPLX2Q6PUV4 134 aaKnown RBP27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 METTL7BQ6UX53 244 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 PDRG1Q9NUG6 133 aa27.21■■□□□ 1.95
SSX2IP-209ENST00000603677 GGPS1O95749 300 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 GNA11P29992 359 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 PSMC6P62333 389 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 SPATA33Q96N06 139 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 ZMYND12Q9H0C1 365 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 SH3GLB2Q9NR46 395 aa27.2■■□□□ 1.94
SSX2IP-209ENST00000603677 B4GALT4O60513 344 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 F2P00734 622 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 ITGB8P26012 769 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 TRIM22Q8IYM9 498 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 CCDC148Q8NFR7 591 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 BICD2Q8TD16 824 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 HIPK3Q9H422 1215 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 C6orf50Q9HD87 102 aa27.19■■□□□ 1.94
SSX2IP-209ENST00000603677 CLK2P49760 499 aaKnown RBP27.18■■□□□ 1.94
SSX2IP-209ENST00000603677 SP2Q02086 613 aa27.18■■□□□ 1.94
SSX2IP-209ENST00000603677 UBIAD1Q9Y5Z9 338 aa27.18■■□□□ 1.94
SSX2IP-209ENST00000603677 PKN1Q16512 942 aa27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 HSDL1Q3SXM5 330 aa27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 TYW1BQ6NUM6 668 aa27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 KAT2BQ92831 832 aa27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 UPF3BQ9BZI7 483 aaKnown RBP27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 JADE2Q9NQC1 790 aa27.17■■□□□ 1.94
SSX2IP-209ENST00000603677 LAMA3Q16787 3333 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 HAS3O00219 553 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 PITPNM1O00562 1244 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 NOP56O00567 594 aaKnown RBP27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 CPLX1O14810 134 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 UBE2SQ16763 222 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 NOC4LQ9BVI4 516 aaKnown RBP27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 RTEL1Q9NZ71 1219 aa27.16■■□□□ 1.94
SSX2IP-209ENST00000603677 SREBF1P36956 1147 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 SEMA3FQ13275 785 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 MTMR1Q13613 665 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 FAM47CQ5HY64 1035 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 NIPA1Q7RTP0 329 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 RPUSD2Q8IZ73 545 aaKnown RBP27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 CCDC155Q8N6L0 562 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 TRPV6Q9H1D0 765 aa27.15■■□□□ 1.94
SSX2IP-209ENST00000603677 CDKL5O76039 1030 aa27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 PFKMP08237 780 aa27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 BFSP2Q13515 415 aa27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 PSRC1Q6PGN9 363 aaPredicted RBP27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 C7orf31Q8N865 590 aa27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 ANO3Q9BYT9 981 aa27.14■■□□□ 1.94
SSX2IP-209ENST00000603677 DEXIO95424 95 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 PARNO95453 639 aaKnown RBP27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 ITGB5P18084 799 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 RFC2P35250 354 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 PSEN2P49810 448 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 SSRP1Q08945 709 aaKnown RBP27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 MFSD10Q14728 455 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 SHHQ15465 462 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 CAGE1Q8TC20 777 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 MXRA8Q9BRK3 442 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 GTF2IRD1Q9UHL9 959 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 NOD1Q9Y239 953 aa27.13■■□□□ 1.93
SSX2IP-209ENST00000603677 CCT2P78371 535 aaKnown RBP27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 KIAA0753Q2KHM9 967 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 CYFIP1Q7L576 1253 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 REXO1Q8N1G1 1221 aaKnown RBP27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 PHKBQ93100 1093 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 GPR20Q99678 358 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 C16orf70Q9BSU1 422 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 SLC26A6Q9BXS9 759 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 C22orf23Q9BZE7 217 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms