RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ABLIM3O94929 683 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 PECAM1P16284 738 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 TYRP1P17643 537 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 EIF1AXP47813 144 aaKnown RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 TMPRSS15P98073 1019 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 NEDD9Q14511 834 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 DDR2Q16832 855 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 TBCELQ5QJ74 424 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 HEATR6Q6AI08 1181 aaKnown RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 NEK11Q8NG66 645 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 BICD2Q8TD16 824 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 MRGPRX2Q96LB1 330 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 BAG1Q99933 345 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 CHCHD6Q9BRQ6 235 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 TEX13BQ9BXU2 312 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 SIL1Q9H173 461 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 DNAAF2Q9NVR5 837 aaKnown RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 TET3O43151 1660 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 GUCA1CO95843 209 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 GNAT2P19087 354 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 XPAP23025 273 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 PMLP29590 882 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 SEMA3AQ14563 771 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 WTAPQ15007 396 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 FAM26DQ5JW98 314 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 NEK10Q6ZWH5 1172 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 EPM2AIP1Q7L775 607 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 DZIP1LQ8IYY4 767 aaKnown RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 IPMKQ8NFU5 416 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 RASGRP4Q8TDF6 673 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 USP6NLQ92738 828 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC10A4Q96EP9 437 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 RMDN2Q96LZ7 410 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 ZSCAN16Q9H4T2 348 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 FBRSQ9HAH7 460 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 KIAA1586Q9HCI6 787 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 BRD4O60885 1362 aaPredicted RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 DISP2A7MBM2 1401 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM75PA6NK02 468 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 MINDY4BA8MYZ0 360 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 ZSCAN9O15535 394 aaPredicted RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 MSL3P1P0C860 447 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 CORO7P57737 925 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PTK2Q05397 1052 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PRKG2Q13237 762 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PPP2R5EQ16537 467 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PREPLQ4J6C6 727 aaPredicted RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 RNF20Q5VTR2 975 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 NRSN1Q8IZ57 195 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 MYCT1Q8N699 235 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 SMOC1Q9H4F8 434 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 RSAD1Q9HA92 442 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PDP2Q9P2J9 529 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM17Q9Y577 477 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 BCL9LQ86UU0 1499 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 KDRP35968 1356 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 COL24A1Q17RW2 1714 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PTCH1Q13635 1447 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 LRRC10BA6NIK2 292 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 AKR1B15C9JRZ8 316 aaPredicted RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 MYO1BO43795 1136 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 EYA4O95677 639 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 CYP1A2P05177 515 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 GZMAP12544 262 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 AKR1B1P15121 316 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 HSPA6P17066 643 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 GARTP22102 1010 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 IRS1P35568 1242 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 RBM6P78332 1123 aaKnown RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 EIF2B5Q13144 721 aaKnown RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 SMC1AQ14683 1233 aaKnown RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PPA1Q15181 289 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PERM1Q5SV97 790 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 MEX3CQ5U5Q3 659 aaKnown RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 ANKRD18AQ8IVF6 992 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM42Q8IWZ5 723 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 CPLX3Q8WVH0 158 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 BHMTQ93088 406 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 L3MBTL2Q969R5 705 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 BICD1Q96G01 975 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 NTPCRQ9BSD7 190 aaKnown RBP5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM7Q9C029 511 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 ACAD9Q9H845 621 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 BRD9Q9H8M2 597 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 ANKIB1Q9P2G1 1089 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 PCDHB11Q9Y5F2 797 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 AK5Q9Y6K8 562 aa5.59□□□□□ -1.51
SPTBN1-206ENST00000602898 RRN3P2A6NIE6 340 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms